Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 122 9e-23 >seq15 Length=603150 Score = 122 bits (134), Expect = 9e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| | || ||||| ||||| || || |||| | |||||||| |||||||||||||| Sbjct 375738 TCGCTGATGTACGTGTCGATAAGCAGCGAGTACGTCTCGGAGTGAATGTTCTCCATGGCA 375679 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 ||||| || ||||| ||||| || || || | || || ||||| || ||| ||||| Sbjct 375678 ATCTGGAAGCCGTAGAAGCAGCGTGCCTCTGGAATCTGTACTTCTGCGCTGAAGCGTTCG 375619 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407 |||| || |||||||||||||| || ||||||||| || || | || ||| ||| Sbjct 375618 ACTAGGTTCTCGTTCACGATGCCATCCGACGCGGCGAAGAAGGCGAGGATGTGCGAGATG 375559 Query 17408 AA 17409 || Sbjct 375558 AA 375557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543225759560