Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 185 1e-41 >seq8 Length=997024 Score = 185 bits (204), Expect = 1e-41 Identities = 268/376 (71%), Gaps = 2/376 (1%) Strand=Plus/Minus Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949 |||||| || |||| |||||| |||||| || |||||||| ||| | |||| || Sbjct 376826 GTGGCAAGGTGGCAAGGCCATTTTCTTCAGGTCGGCGGGGTTCCACGCGCTCAGGATGAT 376767 Query 145950 CCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGC 146008 | || | || | || || |||||| || | |||| |||| |||||||||||| | Sbjct 376766 GCGCC-GATCGTACGGCTTGTTCTTGAGCTTATCGATCACGTCCGCGAGCTGGTCCACAC 376708 Query 146009 CCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGA 146068 |||||||| ||||| || | | ||| |||||| | || |||||||| | |||||||| Sbjct 376707 CCTGCCCCGTATAATCCGTATGCGCGTCGACGTACTCCGCTCCGAAGTGACGCCACTGGA 376648 Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 | || || ||||| || ||||| || || |||||||| || ||| | |||||| Sbjct 376647 AACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTGCCCGAGACCGTTGGCGTCGAGGA 376588 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188 | || ||| ||| ||| ||||||||||||||| |||| | |||||| || ||| Sbjct 376587 ACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCCCTGTTCTGAGAGCGGTTTCGAGG 376528 Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248 ||| || || |||||||||||||||||| | | ||| | | ||| || | || Sbjct 376527 ACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGCAATGACTGCGCGGAGGAACACGCGCT 376468 Query 146249 TGGTGGTCAGCAGGGG 146264 |||| || || ||||| Sbjct 376467 TGGTCGTGAGAAGGGG 376452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074093022680