Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10 102 2e-16 >seq10 Length=848763 Score = 102 bits (112), Expect = 2e-16 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || |||||||| || || || || ||| || || || || || ||| Sbjct 461131 CCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGCCC 461190 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| || || | | | | |||||||| ||||| || || || | || Sbjct 461191 TCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGCGTG 461250 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 ||| ||||||||| ||||| || || || || || || | |||||||| || || Sbjct 461251 CCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAGTCGTAA 461310 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || |||||| || | |||||| ||||| ||||| || || ||||||||||||||| Sbjct 461311 GTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGCATAATCATG 461370 Query 95026 TCCTGAGGGCGCTC 95039 | ||| || | ||| Sbjct 461371 TGCTGTGGTCTCTC 461384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579346790485