Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq10 102 2e-16
>seq10
Length=848763
Score = 102 bits (112), Expect = 2e-16
Identities = 175/254 (69%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || |||||||| || || || || ||| || || || || || |||
Sbjct 461131 CCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGCCC 461190
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905
|| ||||| || || | | | | |||||||| ||||| || || || | ||
Sbjct 461191 TCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGCGTG 461250
Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965
||| ||||||||| ||||| || || || || || || | |||||||| || ||
Sbjct 461251 CCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAGTCGTAA 461310
Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025
|| |||||| || | |||||| ||||| ||||| || || |||||||||||||||
Sbjct 461311 GTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGCATAATCATG 461370
Query 95026 TCCTGAGGGCGCTC 95039
| ||| || | |||
Sbjct 461371 TGCTGTGGTCTCTC 461384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579346790485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |