Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq10 201 1e-46
>seq10
Length=848763
Score = 201 bits (222), Expect = 1e-46
Identities = 547/825 (66%), Gaps = 18/825 (2%)
Strand=Plus/Plus
Query 66060 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATG 66118
||||||||||| || |||||||| |||| | ||| ||| || | ||| | | | |
Sbjct 460852 ACTCGTTTCATGAACAGATCAGGCGTCCACAAAGC-ATAGAAGAGATCACGAGCACGGTT 460910
Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178
|| || || || ||||| | || || | | | ||| ||| |||||| ||
Sbjct 460911 CTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAAAATGTCAGCATGCCATGG 460970
Query 66179 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 66238
|| | ||| ||||| | | | || || || ||||| || |||||||| | |||| |||
Sbjct 460971 CTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGATCAACATATCGAGC 461030
Query 66239 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 66298
|||| || || || | |||||| ||||| | ||| |||||||| || ||||| ||
Sbjct 461031 GGTGGCATCGTAGACACGCAACATAGGAATTAGACCGTTGGATGTGCCGTTGGTACCACC 461090
Query 66299 GATATAGCTTCCACTTGCACGAATAT----TACTAATTGATAGACCTATTCCCCCTGCCA 66354
|| || ||| | |||||||| ||| || | |||| || || || ||
Sbjct 461091 AATGTACGAACCAGTCGCACGAATGCGGTGTACG--TTCA--GACCGATGCCACCGGCAG 461146
Query 66355 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 66414
| || || || | || || || | ||| || |||||||||||||| || || |||
Sbjct 461147 TCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCTATGCTGTCCTCCT 461206
Query 66415 TCATGTTAAGTAGAAAACAGCTAGACATTTG--GTGACGACTAGTTCCCGCATTAAATAA 66472
|||| | | || || ||| || | || | |||| | || || |||||||| |
Sbjct 461207 TCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGC--GTGCCAGCATTAAACAG 461264
Query 66473 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTG 66531
|| ||||| ||||| || || | || | || | |||| | ||| |||||||| ||
Sbjct 461265 AGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAG-TCGTAAGTCTCAATGGCAC 461323
Query 66532 AGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590
|| || || || | || || || || || |||||||| | ||||||||| |||||
Sbjct 461324 TCTCAATGTCTTCACCG-TGTATGCCAACCGCAACACGCATAATCATGTGCTGTGGTCTC 461382
Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650
|| | | |||| || ||| | | |||||| | ||||| ||||| || ||||||
Sbjct 461383 TCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTCTCCAATGTTTTGAAGCCAAAA 461442
Query 66651 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 66710
|| | ||| ||||| || ||||||| || ||||||| || | ||| | ||
Sbjct 461443 TACTGGTAGTTGAAGTCACGGTCGTAAACGATGGCCGAGTTCAGCTCGTCCGCGTGCTTC 461502
Query 66711 TTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTG 66770
| | | ||| ||| | | || || || || | || || || ||||| || |||
Sbjct 461503 ATGATGATATCATACGTAGTCTTCGAGATCATAGGGCAGTGCTTGCCGTTTTTTGGGTTG 461562
Query 66771 ACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGA 66830
||||||||| | | ||| || || ||| | |||| | ||||| |||| ||||| ||
Sbjct 461563 ACATAGTTGTAGAGATCATCGATGACTGCCGAAAATTGCTTTTTAGTTTGCTTGTGAAGG 461622
Query 66831 TTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875
|| ||||||||||| | || || | | || || || ||||||
Sbjct 461623 TTCGATACGGCTATACGTGCAGCGAGCACAGCGTAGTCTGGATGT 461667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658169780632280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |