Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq8 91.5 1e-13
>seq8
Length=997024
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/211 (71%), Gaps = 8/211 (4%)
Strand=Plus/Minus
Query 21131 GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGAT 21190
||| ||||| || | ||||| | ||||| |||||||||||||||| || | |||
Sbjct 376826 GTGGCAAGGTGGCAAGGCCATTTTCTTCAGGTCGGCGGGGTTCCACGCGCTCAGGATGAT 376767
Query 21191 GCGCCGATCGTGGGGCCGCCTGTTAATTAG---ATCCACCACGTAACGC-AGCTGGTCCA 21246
||||||||||| | || |||| | || ||| | ||||| ||| ||||||||||
Sbjct 376766 GCGCCGATCGT---ACGGCTTGTTCTTGAGCTTATCGATCACGT-CCGCGAGCTGGTCCA 376711
Query 21247 CCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACT 21306
| ||||| ||| || | | | || | ||||||||| || || || | |||||
Sbjct 376710 CACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTACTCCGCTCCGAAGTGACGCCACT 376651
Query 21307 GGAACCCGTACACCGGCCCCAGATCGCCCTC 21337
|||| || || || || || || ||||||||
Sbjct 376650 GGAAACCATATACGGGACCGAGGTCGCCCTC 376620
Score = 89.7 bits (98), Expect = 4e-13
Identities = 118/160 (74%), Gaps = 3/160 (2%)
Strand=Plus/Minus
Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCA-CAAAGTCTCCCGGGGTCAGGCCCGTGACGTG 21004
|| ||||| ||||| |||| ||||||| ||| || || || ||||| | ||||||
Sbjct 377068 TACACGTGTGCGTCGCCCATGGTGTGCGTCAACGTG-CCGGGAATCAGGTCGCAGACGTG 377010
Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064
|||| || | |||||| | ||||| ||||||||| ||||| || || ||||||||
Sbjct 377009 GGCGAGCATGTGCGTCAGCAACGCGTACGAGGCGATGTTGAACGGCACGCCTAGGCCCAT 376950
Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAGC-TCCCC 21103
|||| |||| ||| ||||| |||| |||| |||||
Sbjct 376949 GTCGCACGACCGCTGATACAGGATGCAGTGCAGCGTCCCC 376910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427774086638160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |