Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq10 224 1e-53
>seq10
Length=848763
Score = 224 bits (248), Expect = 1e-53
Identities = 599/903 (66%), Gaps = 18/903 (2%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| ||||| || || | |||||| | | ||||| ||| | ||||| | | | |
Sbjct 460774 TCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGAGTGTC 460833
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979
||| |||| | | ||||||||||| || |||||||| |||| | ||| ||| ||
Sbjct 460834 CACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGC-ATAGAA 460892
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
||||| | | | | ||| || || || ||||| | || || | | |
Sbjct 460893 GAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAA 460952
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
||| |||| |||||| || || | ||| ||||| | | | || || || ||||| || ||
Sbjct 460953 AATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACC 461012
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
|||||| | |||| ||||||| || || || | |||||| ||||| | ||| |||||
Sbjct 461013 CTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAGACCGTTGGA 461072
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT----TACTAATTGATA 80215
||| || ||||| || || || ||| | |||||||| ||| || |
Sbjct 461073 TGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACG--TTCA-- 461128
Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275
|||| || || || || | || || || | || || || | ||| || |||||||
Sbjct 461129 GACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGC 461188
Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAG--CTAGACATTTGGTGACGACT 80333
|||||||||| || || |||| | | || || ||| ||| | || |||| |
Sbjct 461189 CCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGC- 461247
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGAT 80392
|| || |||||||| | || ||||| ||||| || || | || | |||| |||| |
Sbjct 461248 -GTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAG-T 461305
Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451
||| |||||||| || || || || || | || || || ||||| ||||||||
Sbjct 461306 CGTAAGTCTCAATGGCACTCTCAATGTCTTCACCG-TGTATGCCAACCGCAACACGCATA 461364
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
| ||||||||| ||||| || | | |||| ||| ||| | | ||| || | |||
Sbjct 461365 ATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTCTCC 461424
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571
|| ||||| || |||||||| | ||| ||||| || ||||||| || |||||||
Sbjct 461425 AATGTTTTGAAGCCAAAATACTGGTAGTTGAAGTCACGGTCGTAAACGATGGCCGAGTTC 461484
Query 80572 AGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGT 80631
|| | ||| | || | | | ||| || | | || || || || | ||
Sbjct 461485 AGCTCGTCCGCGTGCTTCATGATGATATCATACGTAGTCTTCGAGATCATAGGGCAGTGC 461544
Query 80632 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 80691
|| || ||||| || || ||||||||| | | ||| || || ||| | |||| | |||
Sbjct 461545 TTGCCGTTTTTTGGGTTGACATAGTTGTAGAGATCATCGATGACTGCCGAAAATTGCTTT 461604
Query 80692 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGA 80751
|| |||| |||||| || || ||||||||||| | || || | | || || ||||||
Sbjct 461605 TTAGTTTGCTTGTGAAGGTTCGATACGGCTATACGTGCAGCGAGCACAGCGTAGTCTGGA 461664
Query 80752 TGT 80754
|||
Sbjct 461665 TGT 461667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265504941880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |