Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 9e-14 >seq23 Length=461238 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||| | | || | |||||| |||| |||||||| ||||| || ||||| || || Sbjct 205320 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGA 205261 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || |||| |||||| ||| || || || || ||||| || | || Sbjct 205260 CAGCGTGCGACCATCCTCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGG 205201 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || || || || |||| || || | | ||||||||| || || ||| Sbjct 205200 AATACCCTCCTTGTCTTGAATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAAC 205141 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || ||||| ||||| || || || || |||||||||||||| Sbjct 205140 TTCTAGGGTGATCGTCTTTCCTGTGAGCGTCTTCACGAAAATTTGCAT 205093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318776174167566