Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=1244286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||| ||| |||||||||||| || || |||||| ||| | | |||| || ||| || Sbjct 1080211 GCGTTCGATGATCAGCTGCGCAATGCGATCGCCCTCCTTGATCGCGAAGTCTGTGTCGCT 1080270 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 || ||||||| | | ||| | ||| || || |||||||| || || || ||||| Sbjct 1080271 CAAATTGAACAAGATGATCTTCACCTCGCCTCGATAATCGGCGTCGATGACACCGGCGCC 1080330 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||| ||| ||||||| | || || || ||||| ||||| || | ||| Sbjct 1080331 GGTGTCTATGCTGTGCTTGGCTGCAAGACCTGAGCGCGGAGCAACCCTGCC 1080381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052476447304