Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 >seq8 Length=997024 Score = 100 bits (110), Expect = 2e-16 Identities = 209/309 (68%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATC---C 25725 |||||||| |||| || |||||||| || || | || |||| | ||| ||| | Sbjct 376789 GGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGCTTGTTCTTGAGCTTATCGATC 376730 Query 25726 GCGGTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 25784 || | || ||||| ||||| ||| ||||| || || | | ||| ||| Sbjct 376729 ACG----TCCGCGAGCTGGTCCACACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTA 376674 Query 25785 CTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCT 25844 ||| |||||||| | | ||||||||| || || || || || ||||| || ||||| || Sbjct 376673 CTCCGCTCCGAAGTGACGCCACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCT 376614 Query 25845 GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTAC 25904 |||| | | || | || | || |||| | |||||| ||||||||||||| | Sbjct 376613 GTGCCCGAGACCGTTGGCGTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGAT 376554 Query 25905 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGC 25964 |||| || |||||| ||| ||| || || ||| | |||||| |||||||| || Sbjct 376553 GCCCTGTTCTGAGAGCGGTTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGC 376494 Query 25965 CGTGACGGC 25973 |||| || Sbjct 376493 AATGACTGC 376485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136078628291