Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 2e-16
>seq8
Length=997024
Score = 100 bits (110), Expect = 2e-16
Identities = 209/309 (68%), Gaps = 8/309 (3%)
Strand=Plus/Minus
Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATC---C 25725
|||||||| |||| || |||||||| || || | || |||| | ||| ||| |
Sbjct 376789 GGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGCTTGTTCTTGAGCTTATCGATC 376730
Query 25726 GCGGTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 25784
|| | || ||||| ||||| ||| ||||| || || | | ||| |||
Sbjct 376729 ACG----TCCGCGAGCTGGTCCACACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTA 376674
Query 25785 CTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCT 25844
||| |||||||| | | ||||||||| || || || || || ||||| || ||||| ||
Sbjct 376673 CTCCGCTCCGAAGTGACGCCACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCT 376614
Query 25845 GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTAC 25904
|||| | | || | || | || |||| | |||||| ||||||||||||| |
Sbjct 376613 GTGCCCGAGACCGTTGGCGTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGAT 376554
Query 25905 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGC 25964
|||| || |||||| ||| ||| || || ||| | |||||| |||||||| ||
Sbjct 376553 GCCCTGTTCTGAGAGCGGTTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGC 376494
Query 25965 CGTGACGGC 25973
|||| ||
Sbjct 376493 AATGACTGC 376485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340136078628291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |