Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq23 120 3e-22
>seq23
Length=461238
Score = 120 bits (132), Expect = 3e-22
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || ||||| | | || | ||| | ||||| |||||| |||||||| |
Sbjct 205103 AAAATTTGCATACCTCCGCGAAGACGTAGCACAAGGTGCAGAGTAGACTCCTTTTGAATA 205044
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| || || || ||| | ||| || |||||||| || | ||||| | | |||
Sbjct 205043 TTGTAGTCAGACAGAGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATCAGGCGCTGC 204984
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|| ||||| || || || || ||||| | |||||| | ||||||| ||| || |||
Sbjct 204983 TGGTCTGGTGGGATGCCCTCCTTGTCCTGAATTTTGGTCTTGACGTTATCGATGGTATCA 204924
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| |||| ||||||||| |||||||| ||||| || || |||||||||||
Sbjct 204923 GATGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAGATCTGCAT 204865
Score = 102 bits (112), Expect = 7e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
||||||||||| ||| || |||||||| | ||| || || | | || || || ||||
Sbjct 205302 CACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTC--TGACAGCGTGCGACCATCC 205245
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
||||| || || || | ||||| || | ||||||||||| |||||||| || |||||
Sbjct 205244 TCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTTGTCT 205185
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| || | ||| || | | | ||||| | | || || || | ||||| ||
Sbjct 205184 TGAATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGATCGTC 205125
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || || ||||| || || |||||
Sbjct 205124 TTTCCTGTGAGCGTCTTCACGAAAATTTGCAT 205093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289143464120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |