Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq10 392 8e-104
>seq10
Length=848763
Score = 392 bits (434), Expect = 8e-104
Identities = 1185/1800 (66%), Gaps = 55/1800 (3%)
Strand=Plus/Minus
Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTG 363445
|||||| || | || || |||||| |||||||| |||| | |||||||| | | |
Sbjct 461444 TATTTT-GGCTTCAAAACATTGGAGAGGTCCTACCT-TCTCCGAATCAATGGCAAGGTGG 461387
Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505
|| | || ||||| ||| | ||||||||||| |||| || || | || |||
Sbjct 461386 CAGAGAGACCACAGCACATGATTATGCGTGTTGCGGTTGGCATACACGGTGAAGACATTG 461327
Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACGCCAC 363560
| || ||||| || || | ||| || ||| || ||||| ||||| |
Sbjct 461326 AGAGTGCCATTGAGACTTACGA----CTACATG-TCGAATAAGTACTTCACACACGCGTC 461272
Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620
|| || ||| |||||||| || | || ||| | || || ||||| || | |
Sbjct 461271 TCCCACTCTGTTTAATGCTGGCACGCCGTCGCCGCAGCTCTCCTCCTGCTTCCTCATCGA 461212
Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680
|||||||| || ||| ||||| |||| ||||| || |||| |||||| | |||||
Sbjct 461211 TATGAAGGAGGACAGCATAGAGGGCATCTACGACACGCTCAAGACCTGTGCTATGATTTC 461152
Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738
|||| ||| || || || ||| | | || | ||| ||||||| || | || ||
Sbjct 461151 AAAGACTGCCGGTGGCATCGGTCTGAACG-TACACCGCATTCGTGCGACTGGTTCGT-AC 461094
Query 363739 ATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797
||| | || || | || | | || || || || |||| ||| | ||||| | ||
Sbjct 461093 ATTGGTGGTACCAACGGCACA-TCCAACGGTCTAATTCCTATGTTGCGTGTCTACGATGC 461035
Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857
|| || | || || || |||||||| |||||| || || || || || || ||
Sbjct 461034 CACCGCTCGATATGTTGATCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCT 460975
Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--A 363914
||||| ||||| || ||||||| | ||||| | || || ||| |||| || |
Sbjct 460974 TGAGCCATGGCATGCTGACATTTTTGGCTGGCTTGACTTGCGCAAGAACCACGGTAAGGA 460915
Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974
|||| | ||||| |||||||| |||||||| | ||| |||| | || |||||
Sbjct 460914 AGAGAAC---CGTGCTCGTGATCTCTTCTATGCTTTGTGGACGCCTGATCTGTTCATGAA 460858
Query 363975 GCGCGTGGAGGCAGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033
|| || || ||| | || ||| ||||||| || || | ||| || || ||
Sbjct 460857 ACGAGTTGAA-CAGAATGGTATGTGGACACTCTTCTGTCCCAATGAAGCACCTGGCCTCG 460799
Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093
||||||| | || || || | || || |||||||| || || || |||||| |
Sbjct 460798 CCGATGTCTACGGCGAAGAGTTTGAGGCCCTATACGAGAAATACGAGAAGGAGGGCCGTG 460739
Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153
|||| |||| || | || |||||||| |||| |||||| | | | |||| ||||
Sbjct 460738 GTCGTGAGACCATCCGTGCTCAGAAGCTGTGGTATGCCATTCTTCAGGCACAGACCGAGA 460679
Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
| || | |||| ||| | ||||| || | |||||||||||| ||||||| | |||
Sbjct 460678 CTGGCAATCCCTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAAAACC 460619
Query 364214 TTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
| || || || | |||| | ||||| || |||||||| ||||| ||||| || || |||
Sbjct 460618 TGGGAACCATCC-GCAGCTCCAACCTTTGCACCGAGATCATTGAGTACACTGCCCCAGAC 460560
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------T 364326
||| || || |||||| | || || | || || || | ||||| | | |
Sbjct 460559 GAGGTCGCGGTGTGTAACTTGGCCTCTCTGGCTCTGCCAACCTTTGTCGATGTCATGCGT 460500
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386
|| | ||| | || | || |||| || ||| |||| | |||| | ||
Sbjct 460499 GGCGAATACGACTTCAAGAAGCTGCATGAGGTCACCCGCCATGTCGTTCGCAACTTGAAC 460440
Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG-AGCGTTCTAATATGCGTC 364444
||| | ||||||| || | || || | || || || || | | | || ||| | |
Sbjct 460439 AAGATCATCGACATTAACCACTACCCTGTACCAGAGGCACGTAACAGT--AACATGAGAC 460382
Query 364445 ATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGG 364504
| || || || ||| | ||||| ||||| || || || | ||| | || | ||
Sbjct 460381 ACCGTCCTATCGGTGTCGGTGTGCAGGGTCTTGCCGATGCTTTCCTCGCTCTGCGGCTGC 460322
Query 364505 CATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTG 364564
|||| || || || || |||||| | || || | | ||||||||||| || || |
Sbjct 460321 CATTCGACTCTCCAGAGGCTCGTATGCTGAACATCCAAATCTTTGAAACCATATACCACG 460262
Query 364565 CCGCAATGACTGCTTCGTGTGAT-TTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAG 364623
|||| |||| ||||||||||| ||| |||| | ||||| || || | |||||||
Sbjct 460261 CCGCTCTGACAGCTTCGTGTGAGCTTGCCAAAGAGCAAGGTCCC-TATTCGAGTTATGAG 460203
Query 364624 GGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTC 364683
|| || || | || ||||| | || |||| ||| | ||||| || || ||| |||
Sbjct 460202 GGCTCGCCCGTGTCCCAGGGGATTTTGCAGTATGACATGTGGAACGTGACTCCAACTGAT 460143
Query 364684 CGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC--- 364740
| ||| ||||||| | || | | | || ||||||||| |||||||||
Sbjct 460142 CTCTGGGACTGGGACAGCCTCAAAGCTGAGATCAAAAAGCATGGTGTCCGCAACTCCTTA 460083
Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800
||||| ||||||||||| || ||||| ||| | |||||||| || ||||||||||||
Sbjct 460082 CTCGTG---GCGCCCATGCCAACCGCTTCAACTTCTCAGATCCTGGGTAACAACGAGTGC 460026
Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860
||||| || | ||| || | || ||||| || || || |||| || || | |||
Sbjct 460025 TTCGAGCCATATACCTCAAACATCTACTCACGTCGCGTGCTCGCCGGCGAGTTCCAGGTC 459966
Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920
|| ||| | | |||| ||||| ||| || ||||| ||||| ||||||
Sbjct 459965 GTCAATCCTTGGTTGCTCAAAGATCTCGTTGACATGGGTTTGTGGTCTGACAATATGAAG 459906
Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTG 364980
||| ||||| || | |||||| | ||| ||||||| ||||||| ||| |
Sbjct 459905 AACCGCATCATTGCGGAGGGTGGTTCGATTCAGCGCATTCCAAACATTCCAGATGATATT 459846
Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC----TCATTGATATGGC 365036
|| | | ||||| || || |||||||| | || ||| | |||| | |||||
Sbjct 459845 AAAGCATTGTACAAGACGGTCTGGGAAAT----AAGCCAACGCCATGTCATCCAGATGGC 459790
Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096
|||||||| || || || || || |||||| | ||| | ||||| | ||
Sbjct 459789 CGCCGATCGTGGCGCGTTCATTGACCAATCCCAGTCTCTCAACATCCACATGAAGGAACC 459730
Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| | |||| | || |||||||||||| || ||||| |||||| ||||| ||
Sbjct 459729 AACGATGGGCAAGATCACCTCCATGCATTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 459670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303347471386994
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