Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq50 132 3e-26
seq23 89.7 3e-13
>seq50
Length=160357
Score = 132 bits (146), Expect = 3e-26
Identities = 204/291 (70%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259
||||||||||||||| ||| ||||||| |||| ||||||| ||||| || || ||
Sbjct 85625 GTTCTACCGCTACAAGATGGAGCGCATCCAGAGCAAGATCGAGGGCAAGGGCAATGGCAT 85566
Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319
|| |||||||| |||| |||| || || || |||||| ||| || ||| |||
Sbjct 85565 CAAGACCGTCATCCCCAACCTGCCGAGCATCTCTCAGTCGCTCGCACGTCCGCCCAACTA 85506
Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGA 6379
| || || || ||||| | ||| |||||||||||||| | |||| ||| ||||
Sbjct 85505 CGTGATCAAGTACTTCGGCTTCGAGCTTGGCGCTCAGACCAACAAGGATCCCAAGGACGA 85446
Query 6380 GCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTT 6439
|| | ||| | ||||| | || || | |||||||| |||||| || || |||||
Sbjct 85445 CCGGTGGATCATCAACGGTGCTCACGACGCCGCCAAGCTTCAGGACCACCTCGATGGCTT 85386
Query 6440 TATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490
|| | || ||||| || | | ||| | ||||||||||| || ||
Sbjct 85385 CATCAACCGCTTCGTGCTATGCAAGCAGTGCAAAAACCCGGAGACGGATCT 85335
>seq23
Length=461238
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | ||| | ||| | || ||||| |||||||||||||||||| ||||
Sbjct 205093 TACCTCCGCGAAGACGTAGCACAAGGTGCAGAGTAGACTCCTTTTGAATATTGTAGTCAG 205034
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | ||| | || || | ||||| || || || || ||||| || || || | |
Sbjct 205033 ACAGAGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGTG 204974
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||| || |||||| |||||| ||| || || | || ||||| || |
Sbjct 204973 GGATGCCCTCCTTGTCCTGAATTTTGGTCTTGACGTTATCGATGGTATCAGATGACTCGA 204914
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || |||| || || ||||| ||||||||
Sbjct 204913 CCTCAAGCGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAGATCTGCAT 204865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945701843977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |