Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq2 84.2 2e-11
>seq23
Length=461238
Score = 114 bits (126), Expect = 1e-20
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| |||| || || ||||||| | || || ||||| |||
Sbjct 204865 ATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACGCTTGAGGTCGAGTCATCT 204924
Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| || ||||| | || | ||| | |||| ||| ||||| || || || ||||| ||||
Sbjct 204925 GATACCATCGA-TAACGTCAAGACCAAAATTCAG-GACAAGGAGGGCATCCCACCAGACC 204982
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || || || || ||||| | ||||||| || ||| || || ||||
Sbjct 204983 AGCAGCGCCTGATCTTCGCTGGTAAACAGCTCGAAGATGGCCGTACTCTGTCTGACTACA 205042
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||| || || || || || | |||||| | || | |||||
Sbjct 205043 ATATTCAAAAGGAGTCTACTCTGCACCTTGTGCTACGTCTTCGCGGAGG 205091
>seq2
Length=1312579
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| | || || || | ||||| | || ||||||||||| || || |||
Sbjct 554668 TTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCGGATACGATC 554609
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| ||||| || ||| |||||||| || || ||||| ||||| ||||| |
Sbjct 554608 GACAATGTGAAGACCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCAGCAGCGCTTG 554549
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|| ||||| ||||| || | ||||||| ||||| | |||| ||||| || || ||
Sbjct 554548 ATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTAAGCGACTACAACATCCAGAA 554490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326061805105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |