Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq15 136 8e-27
seq1 96.9 7e-15
>seq15
Length=603150
Score = 136 bits (150), Expect = 8e-27
Identities = 260/383 (68%), Gaps = 0/383 (0%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||||||||| | |||||| |||| ||||| ||||||||||||||| ||||| ||
Sbjct 376329 TCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTCCATGAAGTCGAACGGGTTCGTC 376270
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| |||||| ||| | | ||| || || | || | ||||||||| |||||||| |
Sbjct 376269 GCGTTGTACACCTTTGTGTTGCCGAGAGCCATGAGCAAGCGGTCTGCTACAAACTCAATG 376210
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || || | ||||| || | || || ||||| | || || || |
Sbjct 376209 TACTGGCACATAAGGTCTGCATTCATACCGAGCAGGCGGCAAGGCAGGGCTTCGGTGAGG 376150
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802
|| || || ||| ||| || ||||| | || || |||| | ||||| ||
Sbjct 376149 AACTCTTTCTCGATGGAGACAGCCTCGGTGATGATGGCACGCACCGACTCTGGAGACGGC 376090
Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862
|| || | | | | | | || || | | || | ||||| ||||||||||||
Sbjct 376089 TTATTTTGAATCATGCTGAAGAGCAGGCAGGCGAAGTCGGTGTGCATACCCTCGTCGCGT 376030
Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922
|||| ||||||||| | || ||| ||||| | || || ||| | |||||||||
Sbjct 376029 GAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGCATGAGACCTCGCTTCTTAAGCCAGAAG 375970
Query 251923 ATTGCGCAAAAGGATCCAGAGAA 251945
|| | ||||| ||||||||
Sbjct 375969 ATGGAAGCAAAGGCACCAGAGAA 375947
>seq1
Length=1367393
Score = 96.9 bits (106), Expect = 7e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 279708 TCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATGTC 279767
|| |||||||||||||||||||| ||||| |||| ||||| | |||| ||||||||
Sbjct 223709 TCTGGTGGTTGGAAGATGAAGCTTGCCCTTGCTCGAGCCATGTTGATGCGAGCCGATGTG 223650
Query 279768 CTACTGCTTGATGAGCCAACCAACCACATGGAC 279800
|| ||||| ||||| |||||||| ||| |||||
Sbjct 223649 CTTCTGCTGGATGAACCAACCAATCACTTGGAC 223617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027831966918647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |