Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 2e-18
>seq23
Length=461238
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || |||||||| ||||| || || |||||| |||||| || |||||||||
Sbjct 205061 GTAGACTCCTTTTGAATATTGTAGTCAGACAGAGTACGGCCATCTTCGAGCTGTTTACCA 205002
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGT-TT 114304
||| |||| || ||||| ||||| || || ||||| || ||||| ||| ||| || ||
Sbjct 205001 GCGAAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAAT-TTTGGTCTT 204943
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | ||| || | || ||||| || | || | || || || ||||||||
Sbjct 204942 GACGTTATCGATGGTATCAGATGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCAGAGT 204883
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 204882 CTTGACGAAGATCTGCAT 204865
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| || | | || || || | || || || |||||||||||||| ||
Sbjct 205320 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGA 205261
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || ||| ||| || ||||| ||||||||| |||| | ||||| || || || ||
Sbjct 205260 CAGCGTGCGACCATCCTCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGG 205201
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || || ||||| |||||| || | | |||| ||||| | |||||| ||
Sbjct 205200 AATACCCTCCTTGTCTTGAATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAAC 205141
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||| || || || || || || || ||||| |||||
Sbjct 205140 TTCTAGGGTGATCGTCTTTCCTGTGAGCGTCTTCACGAAAATTTGCAT 205093
Score = 96.9 bits (106), Expect = 3e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| ||||||||||| ||| || ||| || ||||| || |||||||||||| ||||
Sbjct 204650 TTCTGAATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCGAGCTGTTTACCAGCGAAGATC 204591
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTC 114313
|| ||||| ||||| || || ||||| || ||||| |||| || || ||| | | ||
Sbjct 204590 AGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATC-TTGGTCTTAACATTGTC 204532
Query 114314 AACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCA 114360
| |||||||| || ||||| || | ||| | || ||||| ||||
Sbjct 204531 GATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 204485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132520817604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |