Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq8 120 3e-22
>seq8
Length=997024
Score = 120 bits (132), Expect = 3e-22
Identities = 200/288 (69%), Gaps = 1/288 (0%)
Strand=Plus/Minus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| ||| || || || | ||||| | || ||| || ||||||||||| | ||
Sbjct 376831 AACATGTGGCAAGGTGGCAAGGCCATTTTCTTCAGGTCGGCGGGGTTCCACGCGCTCAGG 376772
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
||||| | | ||||| ||| || || || | ||| | | || || | |||||
Sbjct 376771 ATGATGCGCCGATCGTACGGCTTGTTCTTGAGCTTATCGATCACGTCCGCGAGCTGGTCC 376712
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| ||||| || ||||| || | || |||||| |||||| |||| || ||||| | ||||
Sbjct 376711 ACACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTACTCCGCTCCGAAGTGACGCCAC 376652
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611
|||||||| || || || || | || ||||| ||||||| | || ||| || |
Sbjct 376651 TGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTGCCCGAGACCGTTGGCGTCG 376592
Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-CTCCTGTTCT 20658
|||||||| | | ||||| |||||| ||||||| ||||||||
Sbjct 376591 AGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCCCTGTTCT 376544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441370775202280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |