Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq10 230 3e-55
seq15 114 2e-20
>seq10
Length=848763
Score = 230 bits (254), Expect = 3e-55
Identities = 1172/1831 (64%), Gaps = 67/1831 (4%)
Strand=Plus/Plus
Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647
|||| || || || |||||||| || |||||||| || |||||||| || | ||||
Sbjct 459646 GCCTGTGTACGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGC 459705
Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707
|| |||| | |||| | ||||| | |||| || ||| | | ||||||||
Sbjct 459706 ATGGAGGTGATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGG 459765
Query 113708 TCGATGAA-GCGTCCACGATCCGCCGCCATATCAATCACATC-CTTCATCTTGATTTCCC 113765
|| ||||| ||| |||||||| || ||||| | || |||| | | ||| |||||||
Sbjct 459766 TCAATGAACGCG-CCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTT-ATTTCCC 459823
Query 113766 ACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGC 113825
| || || |||| | |||||||||||||| || | || || || || |
Sbjct 459824 AGACCGTCTTGTACAATGCTTTAATATCATCTGGAATGTTTGGAATGCGCTGAATCGAAC 459883
Query 113826 CACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGAT 113885
||||| || | ||| | | |||||||| | ||||| | ||| || | |||||
Sbjct 459884 CACCCTCCGCAATGATGCGGTTCTTCATATTGTCAGACCACAAACCCATGTCAACGAGAT 459943
Query 113886 CCT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAG 113940
| | | || | | | |||||| || ||||| || ||||| ||| | | ||
Sbjct 459944 CTTTGAGCAACCA-AGG---ATTGACGACCTGGAACTCGCCGGCGAGCACGCGACGTGAG 459999
Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000
||||| || | || |||||||| |||||||| |||||||||| ||| || | || ||
Sbjct 460000 -TAGATGTTTGAGGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGA 460058
Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCCCTAATGCG 114057
|| || |||||||| |||| ||| | | ||| |||| ||| ||||| | ||
Sbjct 460059 AGCGGTTGGCATGGGCGCCACGAGTAAGGAGTTGCGGACACCATGCTTTT---TGATCTC 460115
Query 114058 TTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-TTTGTCTCCCCCTGCCACATATCAAACT 114116
| |||||| ||||||||| || || | ||| | | | |||||| ||| |||
Sbjct 460116 AGCTTTGAGGCTGTCCCAGTCCCAG-AGATCAGTTGGAGTCACGTTCCACATGTCATACT 460174
Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT-GGGCCCTCAACCTCC 114175
| | || || ||||| | ||||| ||||| || |||| || ||| ||| ||
Sbjct 460175 GCAAAATCCCCTGGGACACGGGCGAGCCCTC--ATAACTCGAATAGGGACCTTGCTCTTT 460232
Query 114176 GCCA-----ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 114230
| || | || |||| | || || ||||| || || || ||||| || |
Sbjct 460233 GGCAAGCTCACACGAAGCTGTC----AGAGCGGCGTGGTATATGGTTTCAAAGATTTGGA 460288
Query 114231 CATTCATTGCCT--TGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACAT 114287
|||| || | ||||| || || || | || | ||| | | || |||
Sbjct 460289 TGTTCA--GCATACGAGCCTCTGGAGAGTCGAATGGCAG-CCGCAGAGCGAGGAAAGCAT 460345
Query 114288 CCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGG 114347
| || ||||| || ||||||| || || || || |||||||| ||| || || ||
Sbjct 460346 CGGCAAGACCCTGCACACCGACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGC-C 460404
Query 114348 TCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 114406
||| || || || || | ||||| | | | || | || ||||
Sbjct 460405 TCTGGTACAGGGTAGTGGTTAATGTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGG 460464
Query 114407 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 114466
|||| ||||| ||||| | | | || | || | | ||| |||| | | ||
Sbjct 460465 GTGACCTCATGCAGCTTCTTGAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGC 460524
Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526
|| || | || |||| |||||||| | | ||| || |||||||||| || ||
Sbjct 460525 AGAGCCAGAGAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATC 460584
Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586
|| || || | || || || ||||| |||| ||| || || || ||| |||
Sbjct 460585 TCGGTGCAAAGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTG 460644
Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646
|| || |||||||| |||||| | || | || ||||| || || | || ||||| ||
Sbjct 460645 CAAGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCA 460704
Query 114647 TTCCAGACATCGGCGGCTG-GCACAG-TGG---CGTTGGCTCGCCCCTCCTCCTCGTACT 114701
| ||| | || ||| |||| | ||| | | || ||||||| |||||| |
Sbjct 460705 TACCA-----CAGCTTCTGAGCACGGATGGTCTCACGACCACGGCCCTCCTTCTCGTATT 460759
Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761
| ||| ||||| ||||||||||| || | | || | ||| || ||||| | || |
Sbjct 460760 TCTCGTATAGGGCCTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGG 460819
Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821
| |||||||| | ||| |||| || ||||| || |||||||| || || || |||
Sbjct 460820 GACAGAAGAGTGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCC 460879
Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881
| | ||| |||||||||| ||| || ||||| | || || || ||||| |
Sbjct 460880 ACAAAGCATAGAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGT 460939
Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----C 114935
| | || | | || || || ||||| || || ||||| | |||| | || |
Sbjct 460940 CAAGCCAGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGC 460999
Query 114936 CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995
||| | | ||| |||| | ||||| | || ||||||| | || || | ||| |
Sbjct 461000 GCTT--GTTG-CCACCCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAG 461056
Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGAC 115053
|||| | ||| | ||| ||| || || || | || ||||| || | | || | |
Sbjct 461057 GAATTAGACCGTTGGATGTGCCGTTGGTACCACCAATGTACGA-AC-CAGTCGCACGAAT 461114
Query 115054 ATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAG 115113
|| | || || ||| || || || || |||||| || || || | ||||
Sbjct 461115 GCGGTGTACGTTCAGACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAG 461174
Query 115114 ACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACAT 115173
|| ||||||| || || || ||| |||| | |||| ||||||||| || |
Sbjct 461175 CGTGTCGTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAG 461234
Query 115174 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-T 115232
|| ||| || || ||||| || || || || || | |||||| |||| ||| | |
Sbjct 461235 CTGCGGCGACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAA-GTACTTAT 461293
Query 115233 GGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCG 115292
||||| | ||||| ||||| | | | ||||||||| ||||| || || | ||
Sbjct 461294 TCGACATGTAGTCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCG 461353
Query 115293 AGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGT 115352
|| ||||||| ||||| || ||| | || || | |||| || | | ||||
Sbjct 461354 CAACACGCATAATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGT 461413
Query 115353 AACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
| | ||||||| || |||| ||||||||
Sbjct 461414 AGGACCTCTCCAATGTTTTGAAGCCAAAATA 461444
>seq15
Length=603150
Score = 114 bits (126), Expect = 2e-20
Identities = 288/438 (66%), Gaps = 0/438 (0%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| |||||||||||||| |||||||| || ||| ||| ||||||||
Sbjct 376348 GTAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTCCAT 376289
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877
|| || || |||||| | | ||| | | ||| || | |||| | ||
Sbjct 376288 GAAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGCCGAGAGCCATGAGCAAGCG 376229
Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937
|| | || |||||||||||| |||| || | |||||||||| ||| ||
Sbjct 376228 GTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCATTCATACCGAGCAGGCGGCA 376169
Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997
|| || || || || |||| | ||||| || || || || | |||||| |
Sbjct 376168 AGGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGATGGCACG 376109
Query 125998 AATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTTG 126057
| | || || |||| | | | ||||||| ||| || ||
Sbjct 376108 CACCGACTCTGGAGACGGCTTATTTTGAATCATGCTGAAGAGCAGGCAGGCGAAGTCGGT 376049
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| | ||||||||| || || ||||| || || |||||| || || |||||||||||
Sbjct 376048 GTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGCATGAGACC 375989
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||| | |||||| || | | ||| | ||| ||||||||||| ||||||||
Sbjct 375988 TCGCTTCTTAAGCCAGAAGATGGAAGCAAAGGCACCAGAGAAGAAGATGCCCTCCACGGC 375929
Query 126178 CGCGAACGCAAAGAGACG 126195
||||| || | ||| ||
Sbjct 375928 AGCGAAGGCGATGAGGCG 375911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597350859640360
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