Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq10 203 3e-47
>seq10
Length=848763
Score = 203 bits (224), Expect = 3e-47
Identities = 966/1517 (64%), Gaps = 36/1517 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | || |||| ||||||||| |||||| ||| ||||| ||| || |||||
Sbjct 461453 AACTACCAGTATTTTGGCTTCAAAACATTGGAGAGGTCCTACCTTCTCCGAATCAATGGC 461394
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| | ||| |||| || || || | ||||| || || | || || ||||| |
Sbjct 461393 AAGGTGGCAGAGAGACCACAGCACATGATTATGCGTGTTGCGGTTGGCATACACGGTGAA 461334
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| || || | | ||| | ||||| | | ||| | || ||
Sbjct 461333 GACATTGAGAGTGCCATTGAGACTTACGACTACATGTCGAATAAGTACTTCACACACGCG 461274
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || || ||||| || || || || ||| ||| ||| | || || || ||||| ||
Sbjct 461273 TCTCCCACTCTGTTTAATGCTGGCACGCCGTCGCCGCAGCTCTCCTCCTGCTTCCTCATC 461214
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| |||| ||| ||| || || | ||||| |||||| |||||| | ||
Sbjct 461213 GATATGAAGGAGGACAGCATAGAGGGCATCTACGACACGCTCAAGACCTGTGCTATGATT 461154
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
||||| || || || ||||| | | || ||| | | ||||| | ||||| |||
Sbjct 461153 TCAAAGACTGCCGGTGGCATCGGTCTGAACGTACACCGCATTCGTGCGACTGGTTCGTAC 461094
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| | |||||||| ||||| |||||||| || | |||||| | || |||| | | |
Sbjct 461093 ATTGGTGGTACCAACGGCACATCCAACGGTCTAATTCCTATGTTGCGTGTCTACGATGCC 461034
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || || || || |||||||| | | | ||| ||||||| | || ||
Sbjct 461033 ACCGCTCGATATGTTGATCAGGGTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCTT 460974
Query 94195 GAGCCCTGGCACGCGGACGT-----GCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
||||| ||||| || ||| | || ||||| ||| |||| ||||||||||| |
Sbjct 460973 GAGCCATGGCATGCTGACATTTTTGGCTGGCTT-----GACTTGCGCAAGAACCACGGTA 460919
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || | | | || | || |||||||| ||| | ||| ||| || || || ||||
Sbjct 460918 AGGAAGAGAACCGTGCTCGTGATCTCTTCTATGCTTTGTGGACGCCTGATCTGTTCATGA 460859
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
|||| || || | || |||| || || |||||||||||| || || ||
Sbjct 460858 AACGAGTTGAACAGAATGGTATGTGGACACTCTTCTGTCCCAATGAAGCACCTGGCCTCG 460799
Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429
|||| || | || ||||| | | | || | ||||| | ||||| |
Sbjct 460798 CCGATGTCTACGGCGAAGAGTTTGAGGCCCTATACGAGAAATACGAGAAGGAGGGCCGTG 460739
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| || || |||| |||||||||| || || | | | |||| ||||
Sbjct 460738 GTCGTGAGACCATCCGTGCTCAGAAGCTGTGGTATGCCATTCTTCAGGCACAGACCGAGA 460679
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | |||| ||| | | ||||||| || |||| |||| ||||||| | |||
Sbjct 460678 CTGGCAATCCCTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAAAACC 460619
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || ||| ||||| || || ||||||||||| | ||||| ||| | || ||||
Sbjct 460618 TGGGAACCATCCGCAGCTCCAACCTTTGCACCGAGATCATTGAGTACACTGCCCCAGACG 460559
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA---GATGCCT 94666
|| | || ||||||||| ||| ||| | ||| | || || || ||| |||| |
Sbjct 460558 AGGTCGCGGTGTGTAACTTGGCCTCTCTGGCTCTGCCAACCTTTGT-CGATGTCATGCGT 460500
Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726
|| ||| |||| | ||| | ||| || | | || | | | ||
Sbjct 460499 -GGCGAATACGACTTC-AAGAAGCTGCATGAG---GTCA----CCCGCCATG--TCGTTC 460451
Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786
||| |||||| | | ||||||| ||| |||||| || || ||||| ||| |
Sbjct 460450 GCAACTTGAACAAGATCATCGACATTAACCACTACCCTGTACCAGAGGCACGTAACAGTA 460391
Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846
|| ||| || || || ||||| |||| || |||||| | || || || | |
Sbjct 460390 ACATGAGACACCGTCCTATCGGTGTCGGTGTGCAGGGTCTTGCCGATGCTTTCCTCGCTC 460331
Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGT-TTGAATTTGAACATATTCGAAAGC 94905
|||| ||||| | ||||||| || || || | |||| | | || || |||| |
Sbjct 460330 TGCGGCTGCCATTCGACTCTCCAGAGGC-TCGTATGCTGAACATCCAAATCTTTGAAACC 460272
Query 94906 ATTTATTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAGATCGGACGGCGGGCCACA 94964
|| || ||| || ||| | || || ||| |||| | | | || | |
Sbjct 460271 ATATACCACGCCGCTCTGACAGCTTCGTGTGAGCTT-GCCAAAGAGCAAGG-TCCCTATT 460214
Query 94965 CGAATCGTTCCG-CGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
||| ||| | || |||||| || ||||| ||||| |||| ||| | ||| |
Sbjct 460213 CGA---GTTATGAGGGCTCGCCCGTGTCCCAGGGGATTTTGCAGTATGACATGTGGAACG 460157
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGT 95082
||| || | | ||| | |||||||| ||| || ||||| | | || || |||
Sbjct 460156 TGACTCCAACTGATCTCTGGGACTGGGACAGC-CTCAAAGCTGAGATCAAAAAGCATGGT 460098
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
|| ||| | | || ||||| |||||||| || || || || | |||||||| ||
Sbjct 460097 GTCCGCAACTCCTTACTCGTGGCGCCCATGCCAACCGCTTCAACTTCTCAGATCCTGGGT 460038
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
|||||||||| ||||| || | ||||| ||| | ||| | || |||||||||||
Sbjct 460037 AACAACGAGTGCTTCGAGCCATATACCTCAAACATCTACTCACGTCGCGTGCTCGCCGGC 459978
Query 95203 GAATTCCCCGTCATCAA 95219
|| |||| ||| ||||
Sbjct 459977 GAGTTCCAGGTCGTCAA 459961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720930457320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |