Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 3e-14 >seq42 Length=202257 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 ||||| | ||| || || ||| |||||||||| ||||| || || ||||| || | || Sbjct 71253 CCGTCTCTACCAGCTCTGCCTGTCTCTTGATAGTAACCTTCGAGCGATTTTGGGAGCGTG 71312 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 ||||| || || || || ||||| || || ||||||||||| ||||| || ||||| Sbjct 71313 TGATGAATGACGAAGCGAACGTCTGGCTTGTCGATGCCCATACCGAAAGCAATCGT 71368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381771092401848