Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 4e-12 >seq23 Length=461238 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || ||||| |||||||| || || | | | || || Sbjct 205301 ACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGACAGCGTGCGACCATCCTCC 205242 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | ||||| ||||| || || |||||| || |||||||| | Sbjct 205241 AGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGA 205182 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| | || ||| | || || || || ||| || |||| ||| || || || Sbjct 205181 ATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGATCGTCTTT 205122 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || || |||||||||||| Sbjct 205121 CCTGTGAGCGTCTTCACGAAAATTTGCATA 205092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390401452595