Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq10 255 7e-63
seq15 118 1e-21
seq29 86.0 8e-12
seq23 82.4 9e-11
>seq10
Length=848763
Score = 255 bits (282), Expect = 7e-63
Identities = 1132/1753 (65%), Gaps = 61/1753 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| | ||||| || ||| | || || || || ||||| ||||| ||
Sbjct 461378 CCACAGCACATGATTATGCGTGTTGCGGTTGGCATACACGGTGAAGACATTGAGAGTGCC 461319
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| |||||| | ||||| | ||| |||| ||||| | || || || ||
Sbjct 461318 ATTGAGACTTACGACTACATGTCGAATAAGTAC-TTCACACACGCGTCTCCCACTCTGTT 461260
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|| ||||| || || || || | ||| || ||||| || | | ||||||||
Sbjct 461259 TAATGCTGGCACGCCGTCGCCGCAGCTCTCCTCCTGCTTCCTCATCGATATGAAGGAGGA 461200
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | ||||| |||| ||| |||| ||||| || |||||| || ||
Sbjct 461199 CAGCATAGAGGGCATCTACGACACGCTCAAGACCTGTGCTATGATTTCAAAGACTGCCGG 461140
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908
||| ||||| || || | || | | || | | || ||||| || | |||||
Sbjct 461139 TGGCATCGGTCTGAACGTACACCGCATTCGTGCGA-CTGGT-TCGTACATTGGTGGTACC 461082
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| || ||| | ||| | ||||| ||| | || || | | ||||| || || |||
Sbjct 461081 AACGGCACATCCAACGGTCTAATTCCTATGTTGCGTGTCTACGATGCCACCGCTCGATAT 461022
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| | || | ||| ||| | | || || |||| | || ||||||||||||
Sbjct 461021 GTTGATCAGGGTGGCAACAAGCGCCCC---GGTGCTTTCGCCATTTACCTTGAGCCATGG 460965
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
|| || || || | | | ||||| ||||| ||||| ||| | || || | | |
Sbjct 460964 CATGCTGACATTTTTGGCTGGCTTGACTTGCGCAAGAACCACGGTAAGGAAGA-GAACCG 460906
Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
||| || |||||||||| ||| | |||| || ||||| |||||||| ||||||| |
Sbjct 460905 TGCTCGTGATCTCTTCTATGCTTTGTGGACGCCTGATCTGTTCATGAAACGAGTTGAACA 460846
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
|| ||| | ||| | ||||| ||||| | | ||||| || ||| |||||| | ||
Sbjct 460845 GAATGGTATGTGGACACTCTTCTGTCCCAATGAAGCACCTGGCCTCGCCGATGTCTACGG 460786
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261
|| |||||||| ||||| ||| || |||||| | || | || | || ||| |
Sbjct 460785 CGAAGAGTTTGAGGCCCTATACGAGAAATACGAGAAGGAGGGCCGTGGTCGTGAGACCAT 460726
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| ||| | || | ||||| | || ||||| || | || ||||||||||| | || |
Sbjct 460725 CCGTGCT-CAGAAGCTGTGGTATGCCATTCTTCAGGCACAGACCGAGACTGGCAATCCCT 460667
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| ||||| || |||| ||||| || || || || |||| |||
Sbjct 460666 TCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAAAACCTGGGAACCATCC 460607
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| |||||||| || || || ||| | || | || | | ||| ||| || ||||
Sbjct 460606 GCAGCTCCAACCTTTGCACCGAGATCATTGAGTACACTGCCCCAGACGAGGTCGCGGTGT 460547
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT-CCA---GAGACAAAGACATTT 112496
||||| | || || | ||||| || | | ||| ||| || | | | || ||
Sbjct 460546 GTAACTTGGCCTCTCTGGCTCTGCCAACCTTTGTCGATGTCATGCGTGGCGAATAC---- 460491
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | | || || || || || || |||| ||| | |||| | ||
Sbjct 460490 GACTTCAAGAAGCTGCATGAGGTCACCCGCCATGTCGTTCGCAACTTGAACAAGATCATC 460431
Query 112557 GATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615
|| | || ||||| || ||| || ||||| ||| |||||||||||||| ||
Sbjct 460430 GACATTAACCACTACCCTGTACCAGA-GGCACGTAACAGTAACATGAGACACCGTCCTAT 460372
Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATT 112674
||| ||||||| || ||||| || |||| ||| | || || || | |||| || |
Sbjct 460371 CGGTGTCGGTGTGCAGGGTCTTGCCGATGCTTTCCTCGCTCTG-CGGCTGCCATTCGACT 460313
Query 112675 CCGACGAAG--CGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
| || | || | | | || | || ||||| || || || |||||||||||
Sbjct 460312 CTCCAGAGGCTCGTATG--CTGAACATCCAAATCTTTGAAACCATATACCACGCCGCTCT 460255
Query 112733 TGAGGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
| | |||| ||| | || | | | ||||| ||| | | |||||| ||
Sbjct 460254 ---GACAGCTTCGTGTGAGCTTGCCAAAGAGCAAGGTCCCTATTCGAGTTATGAGGGCTC 460198
Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCAC 112847
|| | || || ||| | | || | ||| |||| |||| |||| |||| || || |
Sbjct 460197 GCCCGTGTCCCAGGGGATTTTGCAGTATGACATGT-GGAACGTGACTCCAA-CTGATCTC 460140
Query 112848 TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT-- 112905
| ||||||||| ||||| | ||||| || | ||| | || ||| || ||
Sbjct 460139 TGGGACTGGGACAGCCTCAAAGCTGAGATCAAAAAGCATGGTGTCCGCAAC--TCCTTAC 460082
Query 112906 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 112965
| |||| || |||||||| || || || | || ||| ||||||| || || ||||| |
Sbjct 460081 TCGTGGCGCCCATGCCAACCGCTTCAACTTCTCAGATCCTGGGTAACAACGAGTGCTTCG 460022
Query 112966 AACCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024
| || || || | |||||||| || | | | ||||| || ||||| | | |||
Sbjct 460021 AGCCATATACCTCAAACATCTA-CTCACGTCGCGTGCTCGCCGGCGAGTTCCAGGTCGTC 459963
Query 113025 AA--CAAGCAT-CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
|| | | | ||| | || ||| || || ||| | ||||| | ||||||||
Sbjct 459962 AATCCTTGGTTGCTC---AAAGATCTCGTTGACATGGGTTTGTGGTCTGACAATATGAAG 459906
Query 113082 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT 113141
| | ||| | | ||||||||| ||||| ||| | ||||||||||| |||
Sbjct 459905 AACCGCATCATTGCGGAGGGTGGTTCGATTCAGCGCATTCCAAACATTCCAGATGATATT 459846
Query 113142 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAG-GATGTCATTGACATGGCCGC 113200
|| |||||| || || |||||||| ||| | | ||||||| | ||||||||
Sbjct 459845 AAAGCATTGTACAAGACGGTCTGGGAAAT-AAGCCAACGCCATGTCATCCAGATGGCCGC 459787
Query 113201 AGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAA 113259
|||||||| ||| |||||||| ||| || | | || | |||| | ||||
Sbjct 459786 CGATCGTGG-CGCGTTCATTGACCAATCCCAGTCTCTCAACATCCACATGAAGGAACCAA 459728
Query 113260 CGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGA 113319
||||| |||| || | || ||||| | | |||||| |||||||| || || |
Sbjct 459727 CGATGGGCAAGATCACCTCCATGCATTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGGCA 459668
Query 113320 TGTATTACCTCCG 113332
|||| || || ||
Sbjct 459667 TGTACTATCTGCG 459655
>seq15
Length=603150
Score = 118 bits (130), Expect = 1e-21
Identities = 295/441 (67%), Gaps = 8/441 (2%)
Strand=Plus/Plus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241
|| ||| |||| || || || ||||| ||||||||||||||| |||| ||| | ||
Sbjct 375911 CGCCTCATCGCCTTCGCTGCCGTGGAGGGCATCTTCTTCTCTGGTGCCTT-TGCTTCCAT 375969
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
| ||||| |||||||||||||||||||| || | ||||||||||||||| || ||
Sbjct 375970 CTTCTGGCTTAAGAAGCGAGGTCTCATGCCGGGCTTGACCTTCTCCAACGAGCTCATTTC 376029
Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCA-AATTATTGCGTATTA 102360
|| |||||||| | ||| || || || || |||| || ||| | | ||
Sbjct 376030 ACGCGACGAGGGTATGCACACCGACTTCGCCTGCCTGCTCTTCAGCATGATT-CAAAATA 376088
Query 102361 AACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGAT 102420
| || | | ||| | | | | | || | | || || || || ||||| | |
Sbjct 376089 AGCCGTCTCCAGAGTCGGTGCGTGCCATCATCACCGAGGCTGTCTCCATCGAGAAAGAGT 376148
Query 102421 TCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAAT 102480
|| | || ||||| || ||| || ||||||||||| | || |||| | | |
Sbjct 376149 TCCTCACCGAAGCCCTGCCTTGCCGCCTGCTCGGTATGAATGCAGACCTTATGTGCCAGT 376208
Query 102481 ATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAA--TTTGGAA 102538
| ||||||| |||| | || | ||| | | | | || || | | || | | ||
Sbjct 376209 ACATTGAGTTTGTAGCAGACCGCTTGCTCATG--GCTCTCGGCAACACAAAGGTGTACAA 376266
Query 102539 CTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTT 102598
| | | ||| || || ||||||||||||||||| || | || |||||||| |||||
Sbjct 376267 CGCGACGAACCCGTTCGACTTCATGGAGAACATCTCGCTGGCAGGCAAGACAAATTTCTT 376326
Query 102599 CGAAAAGAGGGTTGGGGACTA 102619
||| ||| | ||||| |||||
Sbjct 376327 CGAGAAGCGCGTTGGCGACTA 376347
>seq29
Length=351414
Score = 86.0 bits (94), Expect = 8e-12
Identities = 159/228 (70%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGA 16122
|||||| || ||||||||||| | |||||| ||| || ||||| ||||| | || |
Sbjct 320014 GGCATCGATTTCATCAATGAATATGATGCAAGGTGTGTTTTTC-CGAGCTGTCGCGAACA 320072
Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182
||| || |||||| | || || || || ||||| || ||||| | | | | ||
Sbjct 320073 AATCTCGAACACGCGATGGACCAACTCCGACGAACATTTCAACAAATTCAGAACCAG-AC 320131
Query 16183 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241
| | || ||| || ||| ||||| |||||| | ||| || ||||| || ||||||
Sbjct 320132 ACGGAGAAGAATGGCACACCTGATTCTCCCGCAGTAGCTTTTGCCAGAAGTGTTTTACCC 320191
Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289
|| ||||| || | | || |||||| || |||||||| || |||
Sbjct 320192 GTTCCTGGAGGTCCAGACAAGATGGCACCGCGGGGAATCTTTGCTCCA 320239
>seq23
Length=461238
Score = 82.4 bits (90), Expect = 9e-11
Identities = 210/317 (66%), Gaps = 2/317 (1%)
Strand=Plus/Plus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
||||| | |||||||||||||| ||| ||| || | |||||| | | |||||
Sbjct 92174 GCATCCAATTCATCAATGAAGACAATGGCAGGTGCCTTAGCACGAGCGGCCTGGAAGAGC 92233
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 16184
|| || ||||| || || || |||||||| | | || |||| | | ||| ||||
Sbjct 92234 TCACGAACACGTTTCGCTCCAACACCAACGTAGACTTCATCAAACTCGGACCCGG-ACAT 92292
Query 16185 -TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
| || || || ||| || ||||| || | || |||||||| | |||||| || ||
Sbjct 92293 GTAGAAAAACGGCACACCAGCCTCACCAGCTACTGCACGGGCGAGCAAAGTCTTTCCTGT 92352
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 16303
||| ||| ||| | || | | ||||| ||| | ||| | || | | || |
Sbjct 92353 ACCAGGCGGACCAGTAAGCAAGACACCTTTTGGTAATTTGCCACCCAGAGAAGAAAATTT 92412
Query 16304 CTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCC 16363
||| ||| ||| | || || || | ||||| || ||| ||||| || |||| ||
Sbjct 92413 CTCTGGTGCCTTCAAGAATTCGACCAGCTCTTGCAGTTCTTCTTTTGCCTCGTCGCAGCC 92472
Query 16364 CTCAACATCGGTAAACC 16380
| ||||||| | ||||
Sbjct 92473 ATGAACATCGCTGAACC 92489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620739552344240
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