Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq10 232 8e-56
>seq10
Length=848763
Score = 232 bits (256), Expect = 8e-56
Identities = 1110/1741 (64%), Gaps = 49/1741 (3%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| ||||| ||||| || || |||||||| |||||| | | |||||| || | |
Sbjct 459655 CGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGCATGGAGGTG 459714
Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527
| ||| | || || || ||| | ||| | ||||| || || || |||||
Sbjct 459715 ATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGGTCAATGAAC 459774
Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTG 109587
|||||||| || ||||| | ||||| | |||||| ||||||||||| ||||||
Sbjct 459775 GCGCCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTTATTTCCCAGACCGTCTTG 459834
Query 109588 TACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTC 109647
||||| || |||||||| ||||||| ||| ||||| || ||||| ||
Sbjct 459835 TACAATGCTTTAATATCATCTGGAATGTTTGGAATGCGCTGAATCGAACCACCCTCCGCA 459894
Query 109648 ACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT----CAAC 109703
| ||| | | |||||| | | ||||| | ||| | | |||||| | ||||
Sbjct 459895 ATGATGCGGTTCTTCATATTGTCAGACCACAAACCCATGTCAACGAGATCTTTGAGCAAC 459954
Query 109704 AAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGT 109763
| | | ||| |||| || | || || || || ||| || ||||||||| |
Sbjct 459955 CA-AGGATTGACGACCTGGA---ACTCGCCGGCGAGCACGCGACGTGAGTAGATGTTTGA 460010
Query 109764 CGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCAT 109823
|| || || ||||| ||||| ||||| || ||||| || | ||| ||||| || |||||
Sbjct 460011 GGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGAAGCGGTTGGCAT 460070
Query 109824 GGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCG-- 109881
||| |||| ||| | ||| |||| ||| | | | || | | ||| || ||| |
Sbjct 460071 GGGCGCCACGAGTAAGGAGTTGCGGACACCATGCTTTTTGATC---TCA-GCTTTGAGGC 460126
Query 109882 --TCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTA 109939
||||| || | || || | | | |||| ||| |||| || || | |
Sbjct 460127 TGTCCCAGTCCCAGAGATCAGT-----TGGAGTCACGTTCC-ACATGTCATACTGCAAAA 460180
Query 109940 CACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACT 109999
|||| | | || || |||| ||||| || | || | | | ||| | ||
Sbjct 460181 TCCCCTGGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGGCAAGCT 460240
Query 110000 CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC 110059
| | ||||| || || || || || || || ||||| || || |||| | |
Sbjct 460241 CACACGAAGCTGTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCAGCATAC 460300
Query 110060 GAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAATAAACACATCCGCTAGACCCTGA 110118
||| |||| | ||||||| || || | || | || ||| |||| || ||||||||
Sbjct 460301 GAGCCTCTGGAGAGTCGAATGGCAGCCGCAGAGCGAGGAAAG-CATCGGCAAGACCCTGC 460359
Query 110119 ACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAA 110178
||||||| ||| || || || || |||||||| | || || | ||| |||||
Sbjct 460360 ACACCGACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGCCTCTGGTACAGGGTAG 460419
Query 110179 AAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGT 110238
||| |||||||| | || | || ||| |||| ||||| ||
Sbjct 460420 TGGTTAATGTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGGGTGACCTCATGCAGC 460479
Query 110239 TTGTCGTAATCGAACGTTTTCGTCTC-CTT---ATTGACATATTTGGGGAGAGCAATAGA 110294
|| | | | ||| | |||| | | | | || |||| | | || ||||| | |||
Sbjct 460480 TTCTTGAAGTCGTA----TTCGCCACGCATGACATCGACAAAGGTTGGCAGAGCCAGAGA 460535
Query 110295 CGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAA 110354
|| | || ||||| | ||||||| | | ||||| || | || || || || |
Sbjct 460536 GGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGGTGCAAAG 460595
Query 110355 GTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTT 110414
|||||| || ||| |||| ||| ||||| || ||| |||||| || |||||
Sbjct 460596 GTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTT 460655
Query 110415 ATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CAT 110473
||||||||| | || | ||||| || ||||||| || |||||||| | ||| | | |
Sbjct 460656 GTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATACCACAGCTT 460715
Query 110474 CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCT 110533
| | | | ||| || | | | | || |||| |||||| || ||| | | |||
Sbjct 460716 CTGAG-CACGGATGGTCTCACGACCACGGCCCTCCTTCTCGTATTTCTCGTATAGGGCCT 460774
Query 110534 CAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACC 110593
|||| || | ||||| ||||| | || || || | | |||||||||||| | ||
Sbjct 460775 CAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGAGTGTCC 460834
Query 110594 AATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAA 110653
| | ||| || ||||| | ||||||||||| ||||| |||||| || |||| |
Sbjct 460835 ACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGCATAGAAGA 460894
Query 110654 GGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGA 110713
| ||||| ||| |||||| | ||| ||||| ||| | || | || | | |
Sbjct 460895 GATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAAAA 460954
Query 110714 TATCCGAGTGCCATGGTTCGAGATA------GACAGCGATGGATCCCTTACGACGACCCG 110767
| || | |||||||| || || || || ||| || | ||| | | ||
Sbjct 460955 TGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTT--GTTG-CCAC 461011
Query 110768 CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGG 110827
|||| | |||||| || || ||||||| | |||| | | ||||||||| | || | ||
Sbjct 461012 CCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAGACCGTTGG 461071
Query 110828 ATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATAC 110887
|| || || ||||| | ||| || | | ||||||||| ||| | | || ||
Sbjct 461072 ATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACGTTCAGAC 461131
Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCA 110946
| || ||||| || ||| ||| ||||| ||| |||| || | || || ||
Sbjct 461132 CGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCT-TGAGCGTGTCGTAGATGCCC 461190
Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA-GGCGT 111005
|| || || |||| | | || || ||||| || || | ||| || ||| |||||
Sbjct 461191 TCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGG-CGACGGCGT 461249
Query 111006 TCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGT 111064
|| ||||| || || || || | ||| || |||| || | | ||||| | || ||
Sbjct 461250 GCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAA-GTACTTATTCGACATGTAGTCGT 461308
Query 111065 ATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACA 111124
| || || | || | |||| |||||| || |||| ||||| ||||| | ||
Sbjct 461309 AAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGCATAATCA 461368
Query 111125 T 111125
|
Sbjct 461369 T 461369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973298072600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |