Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq10 286 4e-72
seq15 118 1e-21
>seq10
Length=848763
Score = 286 bits (316), Expect = 4e-72
Identities = 1168/1811 (64%), Gaps = 45/1811 (2%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|| ||||||||||| || |||||||| || | ||||| | | |||||| || | |
Sbjct 459655 CGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGCATGGAGGTG 459714
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA- 105708
| |||| ||||||||| | |||| | || | | || |||||||||||
Sbjct 459715 ATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGGTCAATGAAC 459774
Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATC-CTTCATCTTGATTTCCCACACTGTGC 105767
||| ||||| | || ||||| | ||||||| | | ||| |||||||| || ||
Sbjct 459775 GCG-CCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTT-ATTTCCCAGACCGTCT 459832
Query 105768 GGTAGAGATTCTTGA-TATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| | || ||| | |||||||||| || | || || ||||| ||||| ||| ||
Sbjct 459833 TGTACA-ATGCTTTAATATCATCTGGAATGTTTGGAATGCGCTGAATCGAACCACCCTCC 459891
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886
| ||| | | |||||||| | ||||| | ||| || | |||||| ||||
Sbjct 459892 GCAATGATGCGGTTCTTCATATTGTCAGACCACAAACCCATGTCAACGAGATCTTTGAGC 459951
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC-TCAGATAGATGTTCGT 105945
| ||||| | | ||||| || ||||| | | | || |||||||| |
Sbjct 459952 AACCAAGGATTGACGACCTGGAACTCGCCGGCGAGCACGCGACGTGAG-TAGATGTTTGA 460010
Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005
|| || || || ||||| || || ||||||| ||| || | || || || ||||||||
Sbjct 460011 GGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGAAGCGGTTGGCAT 460070
Query 106006 TGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063
|| |||| | || || ||| || | ||| | | ||||| | |||||
Sbjct 460071 GGGCGCCACGAGTAAGGA--GTTGCGGACACCATGCTTTTTGATCTCAGCTTTGAGGCTG 460128
Query 106064 TCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121
|||||||| || || | |||| |||| |||| |||| ||| | || | | ||| |
Sbjct 460129 TCCCAGTCCCAGA-GATCAGTTGGAGTCACGTTCC-ACATGTCATACTGCAAAATCCCCT 460186
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181
||||| ||| || |||||| | || ||||| |||||| ||| || | |||||
Sbjct 460187 GGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGGCAAGCTCACACG 460246
Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241
|| ||| | ||||| || |||||||||||||| | |||| | || |
Sbjct 460247 AAGCTGTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCAGCATACGAGCCT 460306
Query 106242 CATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCC 106300
| || || |||| | ||| ||| | | || |||| || ||||| || |||||
Sbjct 460307 CTGGAGAGTCGAATG-GCAGCCGCAGAGCGAGGAAAGCATCGGCAAGACCCTGCACACCG 460365
Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATT 106359
| ||| ||||| | ||||| ||| ||| || || || ||| || || || ||
Sbjct 460366 ACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGCC-TCTGGTACAGGGTAGTGGTT 460424
Query 106360 TCTGTCAATGA-CTCGGTTTAGATTTTTGGTAACAATCTTT---GTGATTTCATGAAGTT 106415
|||| |||| || | | || ||| ||| | | |||| ||||| || |
Sbjct 460425 AATGTCGATGATCTTGTTCAAG----TTGCGAACGACATGGCGGGTGACCTCATGCAGCT 460480
Query 106416 TTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475
| | | || | || | | ||| |||| | |||| || || | || ||||
Sbjct 460481 TCTTGAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGCAGAGCCAGAGAGGCCA 460540
Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535
| || || || || ||| || | |||||||| | || || || || | |||||
Sbjct 460541 AGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGGTGCAAAGGTTGG 460600
Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595
| || || || |||| || || ||||| ||||| |||||| || ||||||||||
Sbjct 460601 AGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGA 460660
Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGG-- 106652
||||| |||| | || ||||| ||||||| || ||||| || | ||||| | || |
Sbjct 460661 GCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATACCACAGCTTCTGAG 460720
Query 106653 --CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTC 106710
||| |||| | | | | || |||||| |||||| || ||| ||||| ||
Sbjct 460721 CACGGATGGTCTCACGAC-----CACGGCCCTCCTTCTCGTATTTCTCGTATAGGGCCTC 460775
Query 106711 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA 106770
|||||| || || | |||| ||| || ||||| | | |||||||| || | |||
Sbjct 460776 AAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGAGTGTCCA 460835
Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830
|||| || ||||| || |||||||| || || || |||||| | | |||||
Sbjct 460836 CATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGCATAGAAGAG 460895
Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890
||| | | || |||||| | ||| ||||| || || ||||| | | | ||
Sbjct 460896 ATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAAAAT 460955
Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946
|| || |||||||||||||| || | |||| || || | | | | ||| | |
Sbjct 460956 GTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTG-CCACCCT 461014
Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006
||| ||||| || || ||||| | | || || | ||| ||||| | ||| | |||
Sbjct 461015 GATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAGACCGTTGGATG 461074
Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066
|| || || || | ||| || | | || | | || | || || || |
Sbjct 461075 TGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACGTTCAGACCGA 461134
Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126
| || || || |||||| || ||||| | | || || | ||||| || | |
Sbjct 461135 TGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCTA 461194
Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186
| ||||||||| | |||| |||||||| ||| | |||||| || || ||||
Sbjct 461195 TGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGCGTGCCAG 461254
Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTC 107245
|||| || || || || | ||||| |||| ||| | | ||||| | |||||| |||
Sbjct 461255 CATTAAACAGAGTGGGAGACGCGTGTGTGAA-GTACTTATTCGACATGTAGTCGTAAGTC 461313
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTAT 107305
|| | | || ||||||||||| ||||| ||||| | || |||||||||| |||||
Sbjct 461314 TCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGCATAATCATGTGC 461373
Query 107306 TGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTG 107365
|| ||| | || | |||||| || || |||| ||| | |||| | ||||||
Sbjct 461374 TGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTCTCCAATGTTTTG 461433
Query 107366 AGACCAAAGTA 107376
| ||||| ||
Sbjct 461434 AAGCCAAAATA 461444
>seq15
Length=603150
Score = 118 bits (130), Expect = 1e-21
Identities = 300/453 (66%), Gaps = 10/453 (2%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| ||||| || ||||| || | || ||||| |||||
Sbjct 376347 TAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTCCATG 376288
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA----TGGGTGGCACCCCAACTTGTTTGAGGAG 117101
||||| || || ||| ||||||| | | || || || | | |||| |
Sbjct 376287 AAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGC----CGAGAGCCATGAGCAA 376232
Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161
|| || | ||| |||||||||||| | |||| || | |||||||||| ||
Sbjct 376231 GCGGTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCATTCATACCGAGCAGGCG 376172
Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221
|| || || || || || |||| ||||||| || || ||||| | | ||||||
Sbjct 376171 GCAAGGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGATGGC 376112
Query 117222 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTC 117281
| | | || | || || |||| | | | |||||||| ||| || ||
Sbjct 376111 ACGCACCGACTCTGGAGACGGCTTATTTTGAATCATGCTGAAGAGCAGGCAGGCGAAGTC 376052
Query 117282 CTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAG 117341
||| | |||||| || || ||||| || || || |||||| | ||| ||||||||
Sbjct 376051 GGTGTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGCATGAG 375992
Query 117342 ACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400
||| |||||||| | ||| | || | ||| || | || ||||||||||| |||||||
Sbjct 375991 ACCTCGCTTCTTAAGCCAGAAGATGGAAGCA-AAGGCACCAGAGAAGAAGATGCCCTCCA 375933
Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
| || || || | ||||| ||||||||
Sbjct 375932 CGGCAGCGAAGGCGATGAGGCGTGAGGCGAAGG 375900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978093463080
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