Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
>seq3
Length=1310703
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATG 154930
||||||||| || || ||| || ||| || ||||| ||||||| | | | ||
Sbjct 1029980 TATTATGATCACTTATCCAAGCACCTTTGGAGTGTTTGAGCCTAACATCAAGGAAGTTTG 1029921
Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990
||| | ||||| | | || || ||||| || | || |||||||| | ||||| ||
Sbjct 1029920 CAAGCTTGTTCACAATCACGGCGGCCAGGTGTACATGGACGGAGCAAACATGAATGCTCA 1029861
Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050
| || ||| ||| ||||| ||| ||||| || || ||||| ||| | || ||
Sbjct 1029860 AATTGGTCTATGTTCACCCGGTGAGATTGGCGCAGACGTTTGCCATCTCAACCTGCACAA 1029801
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|| ||||||||||||||||| ||||| || ||||| || ||||| || || ||
Sbjct 1029800 GACGTTCTGTATTCCACATGGTGGTGGTGGACCTGGTGTCGGTCCCATCGGAGT 1029747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579210142861280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |