Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 116 4e-21 >seq3 Length=1310703 Score = 116 bits (128), Expect = 4e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATG 159605 ||||||||| || |||||| || ||| || ||||| | ||||||| | | || Sbjct 1029980 TATTATGATCACTTATCCAAGCACCTTTGGAGTGTTTGAGCCTAACATCAAGGAAGTTTG 1029921 Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665 ||| ||||||| | | || || ||||| || | || || ||||| | ||||| || Sbjct 1029920 CAAGCTTGTTCACAATCACGGCGGCCAGGTGTACATGGACGGAGCAAACATGAATGCTCA 1029861 Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | |||||| ||| |||| ||| ||||| || || ||||| ||| | || || Sbjct 1029860 AATTGGTCTATGTTCACCCGGTGAGATTGGCGCAGACGTTTGCCATCTCAACCTGCACAA 1029801 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||| ||||||||||||||||| ||||| || ||||| || ||||| || || || Sbjct 1029800 GACGTTCTGTATTCCACATGGTGGTGGTGGACCTGGTGTCGGTCCCATCGGAGT 1029747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048502315120