Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 1e-26
>seq8
Length=997024
Score = 134 bits (148), Expect = 1e-26
Identities = 233/339 (69%), Gaps = 0/339 (0%)
Strand=Plus/Minus
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
||||||||| |||| || ||||||||||| || | || |||||| ||| || |
Sbjct 376790 GGGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGCTTGTTCTTGAGCTTATCGAT 376731
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164
||| ||||| ||||| ||| ||||| || || | | ||| ||||||
Sbjct 376730 CACGTCCGCGAGCTGGTCCACACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTACTC 376671
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
|||||||| || | ||||||||| || || || || || ||||| |||||||| |||||
Sbjct 376670 CGCTCCGAAGTGACGCCACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTG 376611
Query 30225 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284
| ||| || | ||| | || |||| | || ||| ||||||||||||| | ||
Sbjct 376610 CCCGAGACCGTTGGCGTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCC 376551
Query 30285 CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30344
|| || |||||| ||| ||| || || ||| | |||||| |||||||| | |
Sbjct 376550 CTGTTCTGAGAGCGGTTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGCAAT 376491
Query 30345 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
||| || || || | |||||||||||| |||||
Sbjct 376490 GACTGCGCGGAGGAACACGCGCTTGGTCGTGAGAAGGGG 376452
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 29766 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825
||||||| ||| || || | ||||||||| || |||| || ||||||||||| ||
Sbjct 377126 GGGAAAGTCTCTCGGTTCGCGCTCGAGCTGCACGTTGAGCGCCTCGACGTGATCCAGATA 377067
Query 29826 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29885
||||| ||||| |||| |||||| ||| || || || || |||||| ||
Sbjct 377066 CACGTGTGCGTCGCCCATGGTGTGCGTCAACGTGCCGGGAATCAGGTCGCAGACGTGGGC 377007
Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945
| ||||| ||| || | | ||| ||||||||| || || || || || ||||||||
Sbjct 377006 GAGCATGTGCGTCAGCAACGCGTACGAGGCGATGTTGAACGGCACGCCTAGGCCCATGTC 376947
Query 29946 CCCCGACCTCTGGTAGAG 29963
| ||||| ||| || ||
Sbjct 376946 GCACGACCGCTGATACAG 376929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408615772330091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |