Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq10 214 3e-50
seq15 165 2e-35
>seq10
Length=848763
Score = 214 bits (236), Expect = 3e-50
Identities = 488/726 (67%), Gaps = 15/726 (2%)
Strand=Plus/Plus
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
||| ||||| | |||||| || || | |||||| | | ||| | |||||| || ||
Sbjct 459957 AGGATTGACGACCTGGAACTCGCCGGCGAGCACGCGACGTGAGTAGATGTTTGAGGTATA 460016
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
||||||| || ||||||||| ||||| ||||| | ||| || || |||||||| ||
Sbjct 460017 TGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGAAGCGGTTGGCATGGGCGC 460076
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAG-GCGCCGAAGCTCTGCCCAGT 213084
||| || | ||| | || || |||| ||| || || ||| | ||||||
Sbjct 460077 CACGAGTAAGGAGTTGCGGACACCATGCTTTTTGATCTCAGCTTTGAGGCTGT-CCCAGT 460135
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| ||| || ||| ||||||||||||||| ||||||| || || |
Sbjct 460136 CCCAG-----AGATCAGTTGGAGTC----ACGTTCCACATGTCATACTGCAAAATCCCCT 460186
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
| |||||| ||||| ||| || ||||| || ||||| ||||| ||||| || |
Sbjct 460187 GGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGGCAAGCTCACACG 460246
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| || ||| || |||| ||| ||||||||||| || | |||| ||| | ||||
Sbjct 460247 AAGCTGTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCAGCATACGAGCCT 460306
Query 213265 CTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323
|||| || ||| |||| | || ||| |||| |||| || || ||||| || |||
Sbjct 460307 CTGGAGAGTCGAATGGCAGCCGCAGAGCG-AGGAAAGCATCGGCAAGACCCTGCACACCG 460365
Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCACTCCTCCAAGGGGTAAAAGTT 213382
| ||||| || | |||||||| |||| || | || ||| | ||||| |||
Sbjct 460366 ACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGC-CTCTGGTACAGGGTAGTGGTT 460424
Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442
||||||||||||||| | |||||| | | |||||| | ||| | ||
Sbjct 460425 AATGTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGGGTGACCTCATGCAGCTTCTT 460484
Query 213443 GTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502
| | | | || | | | | | ||||| ||||| || | ||||| |||
Sbjct 460485 GAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGCAGAGCCAGAGAGGCCAAGTT 460544
Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562
|| || || ||||| | | | | |||||||| |||||||||||||| |||||| ||
Sbjct 460545 ACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGGTGCAAAGGTTGGAGCT 460604
Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622
|||||||| |||||||| | ||||| ||| |||| || ||||||||||||||
Sbjct 460605 GCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCAT 460664
Query 213623 GTAGGG 213628
| ||||
Sbjct 460665 GAAGGG 460670
>seq15
Length=603150
Score = 165 bits (182), Expect = 2e-35
Identities = 347/509 (68%), Gaps = 19/509 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| ||||| |||||||| || ||| ||||||||||||
Sbjct 376351 CTGGTAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTC 376292
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA---G 47955
||||||| ||| ||||| | | ||| |||||| ||| ||| | | ||| |
Sbjct 376291 CATGAAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGCCGA---GAGCCATGAG 376235
Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
|| | | || || || |||| ||||| | |||| ||| ||||| || | ||
Sbjct 376234 CAAGCGGTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCATTCATACCGAGCAG 376175
Query 48016 G-GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| | || || || || | ||||| ||||| ||||| || || || || | |
Sbjct 376174 GCGGCAAGG-CAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGA 376116
Query 48075 TCTGCTTAACGCGG-GACTCTG---AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130
| || |||| ||||||| | || || || | | | || |||||| |
Sbjct 376115 TG-GC---ACGCACCGACTCTGGAGACGGCTTATTTTGAAT---CATGCTGAAGAGCAGG 376063
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||| ||||| |||||| || ||||| || |||||| ||||||||||| |
Sbjct 376062 CAGGCGAAGTCGGTGTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAG 376003
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||||| || | || || |||||||| || | || || | ||||||||||||
Sbjct 376002 CCCGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGAAGCAAAGGCACCAGAGAAGAAG 375943
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
||||||||||| || ||||| ||| |||| | |||| | | ||| |||| |||
Sbjct 375942 ATGCCCTCCACGGCAGCGAAGGCGATGAGGCGTGAGGCGAAGGTGGAGTTGCTGTCAGAG 375883
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339
|||||| ||||||||||| ||||||||
Sbjct 375882 ATCCAGCGGAGCGCCCAGTCAGCCTTCTT 375854
Score = 104 bits (114), Expect = 4e-17
Identities = 180/261 (69%), Gaps = 3/261 (1%)
Strand=Plus/Minus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||| |||| ||||| | ||||| || || |||||||| ||||||||| | |||||
Sbjct 375709 GTACGTCTCGGAGTGAATGTTCTCCATGGCAATCTGGAAGCCGTAGAAGCAGCGTGCCTC 375650
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
| ||| ||||||| | ||| | || | || ||||| || || || ||||| ||
Sbjct 375649 TGGAATCTGTACTTCTGCGCTGAAGCGTTCGACTAGGTTCTCGTTCACGATGCCATCCGA 375590
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| || |||||||| |||| || | ||| |||||||| | | | ||| ||
Sbjct 375589 CGCGGCGAAGAAGGCGAGGATGTGCGAGATGAAGAAGCGCTCGTCATCGTTAAGACGGTT 375530
Query 48604 ---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
|||| | | | ||| ||| ||| || | || || ||||||||||||| || |
Sbjct 375529 GTTCCAGTCAGGAATGTCCTTGGACAGATCGATCTCCTCTGCAGTCCAGAAGGATGCCAT 375470
Query 48661 TGCTTTTTTGTACATGCCCCA 48681
||| || |||||||||| |||
Sbjct 375469 TGCCTTCTTGTACATGCGCCA 375449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931528526593280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |