Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq10 215 1e-50
seq15 141 2e-28
>seq10
Length=848763
Score = 215 bits (238), Expect = 1e-50
Identities = 829/1275 (65%), Gaps = 59/1275 (5%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
||||| || |||||||| ||||| |||||||| |||| || | ||||| |||
Sbjct 460252 GTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCAGCATACGAGCCTCTGGA 460311
Query 221477 GAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534
|| ||| |||| ||||| | | ||||| | ||||| || ||||| || |||| ||
Sbjct 460312 GAGTCGAATGGCAGCCGCAG-AGCGAGGAAAG-CATCGGCAAGACCCTGCACACCGACAC 460369
Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
|||| || | ||||||| |||| | || || ||||| || || || ||| |
Sbjct 460370 CGATAGGACGGTGTCTCATGTTACTGTTACGT--GCCTCTGGTACAGGGTAGTGGTTAAT 460427
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGA--TGACTTTAACCACCTCGGTCAGCTTCTGG 221650
|||||| | ||||| | ||| || || || | ||||| ||||||||
Sbjct 460428 GTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGGGTG--ACCTCATGCAGCTTCT-- 460483
Query 221651 TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACG 221710
|||| | | ||||| | | | | || ||||| | || || |
Sbjct 460484 ----TGAAGTCGTATTCGCCAC------GCATGACATCGACAAAGGTTGGCAGAGCCAGA 460533
Query 221711 CTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAG 221770
||||| ||||||||| || |||||||| | || |||| |||||||| || ||
Sbjct 460534 GAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGGTGCAA 460593
Query 221771 AGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCC 221830
|||||| || |||||| ||||||| || || || |||||| ||| |||||||
Sbjct 460594 AGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAGCGTCC 460653
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||||||||| |||||| ||||||||| ||| ||| ||||| | ||| ||
Sbjct 460654 TTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATACCACAGC 460713
Query 221891 TCTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGA 221948
| |||| || | | || ||| ||| | ||||| ||| | || | ||||||
Sbjct 460714 T-TCTGAGCACGGATGGT-CTCACGACCACGGCCCTCCTTCTCGT-ATTTCTCGTATAGG 460770
Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008
|| ||||||| ||| ||||| | ||| | ||||| || |||||| | |
Sbjct 460771 GC--CTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGA 460828
Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068
| |||| || | || || | | |||||| || || || |||||| || |
Sbjct 460829 GTGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGCAT 460888
Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128
|||||||| | | || | ||| ||| |||| ||| || | || || | |
Sbjct 460889 AGAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGC 460948
Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188
||||||||||||| ||||| ||||| || || | ||| | ||| ||||| ||||||||||
Sbjct 460949 CAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGC 461008
Query 222189 CACCCTGATCCACCATCCTCTCCAG----AGCGTTGAAGATGCGAAGGGTCGGTACCAGT 222244
||||||||| || | | || || || | | ||| || | | || | ||
Sbjct 461009 CACCCTGAT----CAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAGA 461064
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACC-GCCGGCC--CTCAGGT-TACT 222300
||||||||| |||||||| || |||||||| ||| | || | | ||| |||
Sbjct 461065 CCGTTGGATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACG 461124
Query 222301 GGCAGACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359
|||| ||||| |||||||| || ||| || ||||| || ||| ||||||| ||||
Sbjct 461125 TTCAGA----CCGATGCCACCGGCAGTCTTT-GAAATCATAGCACAGGTCTTGAGCGTGT 461179
Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419
| ||||||||| || ||||||||| | | | || || || || || | ||| |
Sbjct 461180 CGTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCG 461239
Query 222420 ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACA 222479
| | | || |||||||| |||||| |||||||| ||||| | ||||
Sbjct 461240 GCGACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACA 461299
Query 222480 TCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA-- 222537
| ||||| ||||| | | | || | |||| || ||||| | ||| ||||
Sbjct 461300 TGTAGTCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTG--TATGCCAACCGCAAC 461357
Query 222538 TCTCATGTACATGTACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTA 222594
| ||| ||||| ||| || |||| |||| || || || ||||| |||||
Sbjct 461358 ACGCATAATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATT-GATTCGGAGA--AGGTA 461414
Query 222595 CGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCAC 222654
|| | |||| || ||||| ||||| || | | || ||||| | | ||| ||| |
Sbjct 461415 GGACCTCTCCAATGTTTTGAAGCCAAAATACTGGTAGTTGAAGTCACGGTCGTAAACGAT 461474
Query 222655 GGCGGCGTCCAGCTC 222669
||| | || ||||||
Sbjct 461475 GGCCGAGTTCAGCTC 461489
>seq15
Length=603150
Score = 141 bits (156), Expect = 2e-28
Identities = 291/436 (67%), Gaps = 7/436 (2%)
Strand=Plus/Plus
Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947
||||| ||||| |||||||||||||| ||| ||| | ||||| |||||||||||||
Sbjct 375920 GCCTTCGCTGCCGTGGAGGGCATCTTCTTCTCTGGTGCCTTTGCTTCCATCTTCTGGCTT 375979
Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
||| || || |||||| || || ||| |||||||||||||| | ||||||
Sbjct 375980 AAGAAGCGAGGTCTCATGCCGGGCTTGACCTTCTCCAACGAGCTCATTTCACGCGACGAG 376039
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067
||| | |||| || || ||||||||||||| || || | | | || || |||
Sbjct 376040 GGTATGCACACCGACTTCGCCTGCCTGCTCTTCA---GCATGATTCAAAATAAGCCGTCT 376096
Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127
| |||| | || ||||||| |||||||| |||||||| ||||| |
Sbjct 376097 CCAGAGTCGGTGCGTGCCATCATCACCGAGGCTGTCTCCATCGAGAAAGAGTTCCTCACC 376156
Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGA 26186
| || ||||| |||| || ||| |||| ||||||||
Sbjct 376157 GAAGCCCTGCCTTGCCGCCTGCTCGGTATGAA-TGCAGACCTTATGTGCCAGTACATTGA 376215
Query 26187 GTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTA 26245
|| ||| || |||| |||| || | || || | | | | |||| || | |
Sbjct 376216 GTTTGTAGCAGACCGCTTGCTCATGGC-TCTCGGCAACACAAAGGTGTACAACGCGACGA 376274
Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305
||||||||||||| ||||| ||||| ||| ||| ||| ||||| || ||||| || |||
Sbjct 376275 ACCCGTTCGACTTCATGGAGAACATCTCGCTGGCAGGCAAGACAAATTTCTTCGAGAAGC 376334
Query 26306 GGGTCGGCGACTATCA 26321
| || |||||||| ||
Sbjct 376335 GCGTTGGCGACTACCA 376350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928840538924480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |