Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq23 96.9 2e-14
seq48 87.8 1e-11
>seq23
Length=461238
Score = 96.9 bits (106), Expect = 2e-14
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || |||||||| ||||| || || | || || ||||| || ||||| || |||||
Sbjct 205248 ATCCTCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTT 205189
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
|||||||||||| || ||| ||||| || || | | | | ||| ||||| ||
Sbjct 205188 GTCTTGAATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGAT 205129
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| ||||| |||||||||||
Sbjct 205128 CGTCTTTCCTGTGAGCGTCTTCACGAAAATTTG 205096
>seq48
Length=172814
Score = 87.8 bits (96), Expect = 1e-11
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| ||||||||||||||||||||||| ||||| ||| | ||||| || || |||||
Sbjct 7526 GCCGTAATTACTGTTCCAGCATATTTCAATGACAATCAGAGACAAGCTACCAAGGATGCC 7467
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
|| ||| | || || || || | || ||||| || ||||| || || ||||| ||
Sbjct 7466 GGCTCAATCTCTGGCCTGAACGTACTCCGAATTATCAACGAACCTACTGCTGCCGCCATT 7407
Query 474857 GCTTATGGTCTTG 474869
|| ||||| ||||
Sbjct 7406 GCGTATGGACTTG 7394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268163457589316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |