Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=1310703 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || || ||||| || ||||| || ||||| ||||||||||||||||| ||||| || Sbjct 1029747 ACTCCGATGGGACCGACACCAGGTCCACCACCACCATGTGGAATACAGAACGTCTTGTGC 1029806 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || || ||||| ||| |||| ||| |||||| | || ||| Sbjct 1029807 AGGTTGAGATGGCAAACGTCTGCGCCAATCTCACCGGGTGAACATAGACCAATTTGAGCA 1029866 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||||| || || | || ||||| || || | | ||||| | ||| || | Sbjct 1029867 TTCATGTTTGCTCCGTCCATGTACACCTGGCCGCCGTGATTGTGAACAAGCTTGCAAACT 1029926 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA 138416 | ||||||| | ||||| || ||| || |||||| || ||||||||| Sbjct 1029927 TCCTTGATGTTAGGCTCAAACACTCCAAAGGTGCTTGGATAAGTGATCATAATA 1029980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995743844840