Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq10 293 3e-74
seq15 118 1e-21
>seq10
Length=848763
Score = 293 bits (324), Expect = 3e-74
Identities = 1176/1820 (65%), Gaps = 45/1820 (2%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205
|| ||||| ||||||| | |||| | ||| |||| || || |||||| |
Sbjct 461444 TATTTTGGCTTCAAAACATTGGAGAGGTCCTACCTTCTCCGAATCAATGGCAAGGTGGCA 461385
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
|| | |||||| ||||| | ||||| || || | ||||| ||||| |||||||||||
Sbjct 461384 GAGAGACCACAGCACATGATTATGCGTGTTGCGGTTGGCATACACGGTGAAGACATTGAG 461325
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324
|| | | ||||| |||||| | ||||| | | ||| |||| ||||| | || ||
Sbjct 461324 AGTGCCATTGAGACTTACGACTACATGTCGAATAAGTAC-TTCACACACGCGTCTCCCAC 461266
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
|| || |||||||| || || |||||| | ||| |||||||| |||| | ||
Sbjct 461265 TCTGTTTAATGCTGGCACGCCGTCGCCGCAGCTCTCCTCCTGCTTCCTCATCGATATGAA 461206
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
||||||| || | || ||||| | || || | | ||||| || ||||||
Sbjct 461205 GGAGGACAGCATAGAGGGCATCTACGACACGCTCAAGACCTGTGCTATGATTTCAAAGAC 461146
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504
|| || || || || || || | || | | || | | || ||| | ||
Sbjct 461145 TGCCGGTGGCATCGGTCTGAACGTACACCGCATTCGTGCGACTGGTTCGTACATTGGTGG 461086
Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564
|| || || ||| | ||| | ||||| ||| | || || | | ||||| || ||
Sbjct 461085 TACCAACGGCACATCCAACGGTCTAATTCCTATGTTGCGTGTCTACGATGCCACCGCTCG 461026
Query 75565 CTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620
||||| |||| | | ||| | || || | |||| | ||| | || ||||
Sbjct 461025 ATATGTTGATCAGG-GTGGCAACAAGCGCCCCGGTGCTTTCGCCATTTACCTTGAGCCAT 460967
Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680
||||||| || || | | | ||||| || || ||||| ||| | |||||| |
Sbjct 460966 GGCATGCTGACATTTTTGGCTGGCTTGACTTGCGCAAGAACCACGGTAAGGAAGAGAACC 460907
Query 75681 GGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740
| | | |||||||| | | |||||| || || || |||||||| || |||||
Sbjct 460906 GTGCTCGTGATCTCTTCTATGCTTTGTGGACGCCTGATCTGTTCATGAAACGAGTTGAAC 460847
Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800
|| |||| ||| | || |||||||| | | ||||| || ||| |||| | |
Sbjct 460846 AGAATGGTATGTGGACACTCTTCTGTCCCAATGAAGCACCTGGCCTCGCCGATGTCTACG 460787
Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860
| || |||||||| ||||| ||| || || || ||||||| | | || |||
Sbjct 460786 GCGAAGAGTTTGAGGCCCTATACGAGAAATACGAGAAGGAGGGCCGTGGTCGTGAGACCA 460727
Query 75861 TACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919
| || | | || | | ||| | || ||||| | ||||||| |||||||| | ||
Sbjct 460726 T-CCGTGCTCAGAAGCTGTGGTATGCCATTCTTCAGGCACAGACCGAGACTGGCAATCCC 460668
Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979
| ||||| |||||||| ||||| ||| ||||| ||||| || || ||||||| |||
Sbjct 460667 TTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAAAACCTGGGAACCATC 460608
Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039
||||| || |||||||| || || | |||||||| | || ||| || ||
Sbjct 460607 CGCAGCTCCAACCTTTGCACCGAGATCATTGAGTACACTGCCCCAGACGAGGTCGCGGTG 460548
Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099
|| || ||||| || | || || |||| | |||| ||| | | || | ||
Sbjct 460547 TGTAACTTGGCCTCTCTGGCTCTGCCAACCTTTGTCGATGTCATGCGTGGCGAATACGAC 460488
Query 76100 TATGAAAAACTTCATGAAATCAC---AAAGATTGTTACCAAAAATCTAAACCGAG-TCAT 76155
| | || || ||||| |||| | | ||| ||| || | | || ||||
Sbjct 460487 TTCAAGAAGCTGCATGAGGTCACCCGCCATGTCGTTCGCAA----CTTGAACAAGATCAT 460432
Query 76156 TGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
|||| || || || || ||| || || || ||| ||| ||||| | ||||
Sbjct 460431 CGACATTAACCACTACCCTGTACCAGA-GGCACGTAACAGTAACATGAGACACCGTCCTA 460373
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGAT 76273
| ||| | ||||| || ||||| || |||| || | | ||| ||| | |||| ||
Sbjct 460372 TCGGTGTCGGTGTGCAGGGTCTTGCCGATGCTTTCCTCGCTCTGCGGCTGC-CATTCGAC 460314
Query 76274 TCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTG 76333
|| || || | |||| | |||||||||||||| || ||||| | |||
Sbjct 460313 TCTCCAGAGGCTCGTATGCTGAACATCCAAATCTTTGAAACCATATACCACGCCGCTCTG 460254
Query 76334 GAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| ||||| | || ||| |||||| ||||| || | |||||| || |||
Sbjct 460253 ACAGCTTCGTGTGAGCTTGCCAAAGAGCAAGGTCCCTATTCGAGTTATGAGGGCTCGCCC 460194
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACG 76451
| |||||| ||| | | |||| ||| |||| |||| |||| |||| | || || |
Sbjct 460193 GTGTCCCAGGGGATTTTGCAGTATGACATGT-GGAACGTGACTCCAACTGATC-TCTGGG 460136
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGAT 76509
||||||| ||||| | ||||| || | ||| | || ||| || || | |
Sbjct 460135 ACTGGGACAGCCTCAAAGCTGAGATCAAAAAGCATGGTGTCCGCAAC--TCCTTACTCGT 460078
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
||| || |||||||| || || || | || ||| ||||||| || || ||||| || ||
Sbjct 460077 GGCGCCCATGCCAACCGCTTCAACTTCTCAGATCCTGGGTAACAACGAGTGCTTCGAGCC 460018
Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629
||| || ||||||||||| | | ||||| || |||| || ||| |||
Sbjct 460017 ATATACCTCAAACATCTACTCACGTCGCGTGCTCGCCGGCGAGT---TCCAGGTCGTCAA 459961
Query 76630 GCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685
| | | | |||| || ||| | || ||| | ||||| | |||||||| | |
Sbjct 459960 TC-CTTGGTTGCTCAAAGATCTCGTTGACATGGGTTTGTGGTCTGACAATATGAAGAACC 459902
Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATA-TCAAG 76744
||| | | ||||||||| ||||| || || | || |||||||||| | |||
Sbjct 459901 GCATCATTGCGGAGGGTGGTTCGATTCAGCGCATTCCAAACATTCCAGATGATATTAAAG 459842
Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAG--ATGTCATTGACATGGCCGCAG 76802
|| | ||| || || |||||||| ||| || | ||||||| | |||||||| |
Sbjct 459841 CAT-TGTACAAGACGGTCTGGGAAAT-AAG-CCAACGCCATGTCATCCAGATGGCCGCCG 459785
Query 76803 ATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACG 76861
||||||| ||| |||||||| ||| || | | || | |||| | ||||||
Sbjct 459784 ATCGTGG-CGCGTTCATTGACCAATCCCAGTCTCTCAACATCCACATGAAGGAACCAACG 459726
Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
||| |||| || | || |||||| | | ||||| | || ||||| || || |||
Sbjct 459725 ATGGGCAAGATCACCTCCATGCATTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGGCATG 459666
Query 76922 TACTATCTCCGATCAAAGGC 76941
|||||||| || || ||||
Sbjct 459665 TACTATCTGCGTACACAGGC 459646
>seq15
Length=603150
Score = 118 bits (130), Expect = 1e-21
Identities = 300/453 (66%), Gaps = 10/453 (2%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||||||| ||||| | || || || |||||||| ||||||||||| || | |
Sbjct 375900 CCTTCGCCTCACGCCTCATCGCCTTCGCTGCCGTGGAGGGCATCTTCTTCTCTGGTGCCT 375959
Query 65129 TCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
| ||| | || | ||| | |||||||| ||||||||||| ||| | |||||| ||
Sbjct 375960 T-TGCTTCCATCTTCTGGCTTAAGAAGCGAGGTCTCATGCCGGGCTTGACCTTCTCCAAC 376018
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247
|| || ||||| || || |||||| | ||| || || ||| |||||||| |
Sbjct 376019 GAGCTCATTTCACGCGACGAGGGTATGCACACCGACTTCGCCTGCCTGCTCTTCAGCATG 376078
Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307
| | |||| || || | || | | | |||||| | | ||||| || ||
Sbjct 376079 ATTCAAAATAAGCCGTCTCCAGAGTCGGTGCGTGCCATCATCACCGAGGCTGTCTCCATC 376138
Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367
||||||| |||| || || || || || || || |||||||||| | ||
Sbjct 376139 GAGAAAGAGTTCCTCACCGAAGCCCTGCCTTGCCGCCTGCTCGGTATGAATGCAGACCTT 376198
Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCC 65427
|||| | |||||||||||| ||| | || || | |||| | | || || |
Sbjct 376199 ATGTGCCAGTACATTGAGTTTGTAGCAGACCGCTTGCTCATGGCTCTCG----GCAACAC 376254
Query 65428 A----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483
| | | ||||||| ||| || || ||||| ||||| ||||| || | || ||
Sbjct 376255 AAAGGTGTACAACGCGACGAACCCGTTCGACTTCATGGAGAACATCTCGCTGGCAGGCAA 376314
Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||| || ||||| |||||||| ||||| |||||
Sbjct 376315 GACAAATTTCTTCGAGAAGCGCGTTGGCGACTA 376347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566863236960
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