Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq23 104 4e-17 >seq23 Length=461238 Score = 104 bits (114), Expect = 4e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||| |||| || | ||| || ||| || ||||| || | ||| | | | Sbjct 205307 CGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGACAGCGTGCGACCA 205248 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || || || || || || | ||| ||||| || || || || || || Sbjct 205247 TCCTCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTTG 205188 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || ||||| || | ||| ||| || || || || ||||||||||| || || Sbjct 205187 TCTTGAATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGATC 205128 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| ||||| || || || |||||||| Sbjct 205127 GTCTTTCCTGTGAGCGTCTTCACGAAAATTTGCAT 205093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650272835440