Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq50 154 1e-32 >seq50 Length=160357 Score = 154 bits (170), Expect = 1e-32 Identities = 210/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 34313 TGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCAT 34372 |||| || ||||||||||| | || | | || | ||| || | |||||| |||| Sbjct 85333 TGAGATCCGTCTCCGGGTTTTTGCACTGCTTGCATAGCACGAAGCGGTTGATGAAGCCAT 85392 Query 34373 CAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTT 34432 | || ||||||| | ||| ||| |||||| | ||||||| ||| | || |||| | Sbjct 85393 CGAGGTGGTCCTGAAGCTTGGCGGCGTCGTGAGCACCGTTGATGATCCACCGGTCGTCCT 85452 Query 34433 TGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGG 34492 || ||| | || || ||||| |||||| | ||||||||||| || ||| ||| Sbjct 85453 TGGGATCCTTGTTGGTCTGAGCGCCAAGCTCGAAGCCGAAGTACTTGATCACGTAGTTGG 85512 Query 34493 CCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGT 34552 ||||||| | |||| || | ||| |||| |||| |||||| ||||||||||| | Sbjct 85513 GCGGACGTGCGAGCGACTGAGAGATGCTCGGCAGGTTGGGGATGACGGTCTTGATGCCAT 85572 Query 34553 TGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605 ||||||| || |||| |||| ||||||| ||| ||||||||||||||| Sbjct 85573 TGCCCTTGCCCTCGATCTTGCTCTGGATGCGCTCCATCTTGTAGCGGTAGAAC 85625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839753436931