Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 8e-15
>seq10
Length=848763
Score = 96.9 bits (106), Expect = 8e-15
Identities = 212/317 (67%), Gaps = 3/317 (1%)
Strand=Plus/Minus
Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA--- 110745
|||| ||||| | |||| | | | ||| || |||||| |||| ||||| || |
Sbjct 461059 TTCCTATGTTGCGTGTCTACGATGCCACCGCTCGATATGTTGATCAGGGTGGCAACAAGC 461000
Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805
| || | || || || || || || || |||||| | || || |||| | | |
Sbjct 460999 GCCCCGGTGCTTTCGCCATTTACCTTGAGCCATGGCATGCTGACATTTTTGGCTGGCTTG 460940
Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865
| | || || || || || ||||| | | || |||||| | || ||||| |||
Sbjct 460939 ACTTGCGCAAGAACCACGGTAAGGAAGAGAACCGTGCTCGTGATCTCTTCTATGCTTTGT 460880
Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925
||| | ||| | ||||||||||| ||| || | ||||| |||||| | || | ||||
Sbjct 460879 GGACGCCTGATCTGTTCATGAAACGAGTTGAACAGAATGGTATGTGGACACTCTTCTGTC 460820
Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985
| || | ||||| || | ||||| || || |||||||||| | ||| ||||| |
Sbjct 460819 CCAATGAAGCACCTGGCCTCGCCGATGTCTACGGCGAAGAGTTTGAGGCCCTATACGAGA 460760
Query 110986 AATATGAAAAAGAAGGC 111002
|||| || || || |||
Sbjct 460759 AATACGAGAAGGAGGGC 460743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186807219383687
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |