Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 8e-15 >seq10 Length=848763 Score = 96.9 bits (106), Expect = 8e-15 Identities = 212/317 (67%), Gaps = 3/317 (1%) Strand=Plus/Minus Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA--- 110745 |||| ||||| | |||| | | | ||| || |||||| |||| ||||| || | Sbjct 461059 TTCCTATGTTGCGTGTCTACGATGCCACCGCTCGATATGTTGATCAGGGTGGCAACAAGC 461000 Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 | || | || || || || || || || |||||| | || || |||| | | | Sbjct 460999 GCCCCGGTGCTTTCGCCATTTACCTTGAGCCATGGCATGCTGACATTTTTGGCTGGCTTG 460940 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | | || || || || || ||||| | | || |||||| | || ||||| ||| Sbjct 460939 ACTTGCGCAAGAACCACGGTAAGGAAGAGAACCGTGCTCGTGATCTCTTCTATGCTTTGT 460880 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 ||| | ||| | ||||||||||| ||| || | ||||| |||||| | || | |||| Sbjct 460879 GGACGCCTGATCTGTTCATGAAACGAGTTGAACAGAATGGTATGTGGACACTCTTCTGTC 460820 Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 | || | ||||| || | ||||| || || |||||||||| | ||| ||||| | Sbjct 460819 CCAATGAAGCACCTGGCCTCGCCGATGTCTACGGCGAAGAGTTTGAGGCCCTATACGAGA 460760 Query 110986 AATATGAAAAAGAAGGC 111002 |||| || || || ||| Sbjct 460759 AATACGAGAAGGAGGGC 460743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807219383687