Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq23 111 1e-19 >seq23 Length=461238 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || ||||| ||| ||||| |||||||| || || || ||||| | Sbjct 205308 ACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGACAGCGTGCGACC 205249 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||| || || || || ||||| |||||||||||| | || | ||| || || Sbjct 205248 ATCCTCCAGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTT 205189 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || || | |||| ||| | ||||| ||||| || || | |||| Sbjct 205188 GTCTTGAATCTT-GGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGA 205130 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || ||||| | ||| || || || || |||||| Sbjct 205129 TCGTCTTTCCTGTGAGCGTCTTCACGAAAATTTGCATA 205092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702529768640