Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq23 102 8e-17
seq15 84.2 2e-11
>seq23
Length=461238
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||| |||||||| || ||||| |||||||||||||||||| |
Sbjct 205058 GACTCCTTTTGAATATTGTAGTCAGACAGAGTACGGCCATCTTCGAGCTGTTTACCAGCG 204999
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || ||||| || ||||| || ||||| || || || |||||| || |
Sbjct 204998 AAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATTTTGGTCTTGACG 204939
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | | ||| || || | ||| | || || ||||||||||| ||
Sbjct 204938 TTATCGATGGTATCAGATGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCAGAGTCTTG 204879
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 204878 ACGAAGATCTGCAT 204865
>seq15
Length=603150
Score = 84.2 bits (92), Expect = 2e-11
Identities = 242/363 (67%), Gaps = 17/363 (5%)
Strand=Plus/Plus
Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973
||||||||| |||| ||| |||||| | || || |||||||| || | ||||| |||
Sbjct 375995 ATGCCGGGCTTGACCTTCTCCAACGAGCTCATTTCACGCGACGAGGGTATGCACACCGAC 376054
Query 46974 TTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAAATTAAACT----CGGACACGA 47028
|| || || || || || || || ||| | | |||| | | | || ||
Sbjct 376055 TTCGCCTGCCTGCTCTT-CA------GCATGATTCA-AAATAAGCCGTCTCCAGAGTCGG 376106
Query 47029 TCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGC 47088
| | ||| | | ||||| || |||||| || ||||| | || | || ||||
Sbjct 376107 TGCGTGCCATCATCACCGAGGCTGTCTCCATCGAGAAAGAGTTCCTCACCGAAGCCCTGC 376166
Query 47089 CC-GTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCG 47147
| | ||||| ||| || ||||| ||| | ||||||| | || ||||||||||| ||
Sbjct 376167 CTTGCCGCCT-GCTCGGTATGAATGCAGACCTTATGTGCCAGTACATTGAGTTTGTAGCA 376225
Query 47148 GATCGTCTGTTGGTGCAGCTCGGACAACCGAAATAT-TTTAATGCTCGTAATCCGTTTGA 47206
|| || || | || ||||| |||| ||| | | || || || ||||| ||
Sbjct 376226 GACCGCTTGCTCATGGCTCTCGG-CAACACAAAGGTGTACAACGCGACGAACCCGTTCGA 376284
Query 47207 GTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGA 47266
|| ||| | ||||| ||||| | ||||| || ||||| |||||||| || || || ||
Sbjct 376285 CTTCATGGAGAACATCTCGCTGGCAGGCAAGACAAATTTCTTCGAGAAGCGCGTTGGCGA 376344
Query 47267 GTA 47269
||
Sbjct 376345 CTA 376347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609013546120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |