Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 1e-15
>seq8
Length=997024
Score = 98.7 bits (108), Expect = 1e-15
Identities = 146/203 (72%), Gaps = 3/203 (1%)
Strand=Plus/Minus
Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967
||||| | || || | ||| ||||| | || || ||||| ||||| |||| |||||||
Sbjct 377101 AGCTGCACGTTGAGCGCCTCGACGTGATCCAGATACACGTGTGCGTCGCCCATGGTGTGC 377042
Query 146968 A-CAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA 147026
||| || || || | ||| || |||||||| | ||||| || |||| || |||
Sbjct 377041 GTCAACGTGCCG-GGAATCAGGTCGCAGACGTGGGCGAGCATGTGCGTCAGCAACGCGTA 376983
Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
||| |||||||| || || || ||||||||||| | ||||| ||| ||||| |||
Sbjct 376982 CGAGGCGATGTTGAACGGCACGCCTAGGCCCATGTCGCACGACCGCTGATACAGGATGCA 376923
Query 147087 CGAGAGC-TCCCCGTCGGCCACG 147108
||| ||||| |||||| ||
Sbjct 376922 GTGCAGCGTCCCCTTCGGCCGCG 376900
Score = 87.8 bits (96), Expect = 2e-12
Identities = 228/339 (67%), Gaps = 14/339 (4%)
Strand=Plus/Minus
Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183
|||||||| || |||| ||||| |||||| ||||||||||| || | |
Sbjct 376828 ATGTGGCAAGGTGGCAAGGCCATTTTCTTCAGGTCGGCGGGGTTCCACGCGCTCAGGATG 376769
Query 147184 AGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCAC 147242
| |||| | || | || || |||| | || ||||| || | |||||||||||
Sbjct 376768 ATGCGCC-GATCGTACGGCTTGTTCTTGAGCTTATCGATCACGTCCGCGAGCTGGTCCAC 376710
Query 147243 GCCCTGGCCCCCGTAGTTTGTCC-----CGCAGTCCACGTACCTGGCCCCAAAGTGCCTC 147297
||||| ||||||| | ||| ||| ||| |||||| || || ||||| | |
Sbjct 376709 ACCCTG--CCCCGTA--TAATCCGTATGCGC-GTCGACGTACTCCGCTCCGAAGTGACGC 376655
Query 147298 CACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC 147357
|||||||| || || || || || |||||||| | ||||||| || | ||| ||
Sbjct 376654 CACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTGCCCGA-GACCGTTGGC 376596
Query 147358 TT-GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTC 147416
| ||| ||||| || ||| | | |||||||||| | |||| | ||||||
Sbjct 376595 GTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCCCTGTTCTGAGAGCGG 376536
Query 147417 CTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
|| ||| ||| ||||| |||||||||||||||||
Sbjct 376535 TTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTC 376497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583485323248800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |