Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq23 105 6e-18
seq10 95.1 1e-14
>seq23
Length=461238
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || |||||||| |||||||| || |||| | || ||
Sbjct 205301 ACCAAGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCTGACAGCGTGCGACCATCCTCC 205242
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || ||||| ||| | || | ||||| ||||| || || | |||||| || ||
Sbjct 205241 AGTTGCTTACCAGCGAAGATCAAGCGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGA 205182
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | |||| | || | ||||||| || |||||||||||| || || | ||
Sbjct 205181 ATCTTGGTCTTCACATTGTCAATCGTGTCTGAGGATTCAACTTCTAGGGTGATCGTCTTT 205122
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| || || || ||||| || ||||||||| ||
Sbjct 205121 CCTGTGAGCGTCTTCACGAAAATTTGCATACCT 205089
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || ||||||||||||||||| || | || | |||||||||||||||||
Sbjct 205061 GTAGACTCCTTTTGAATATTGTAGTCAGACAGAGTACGGCCATCTTCGAGCTGTTTACCA 205002
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || ||||| || || || || | ||||| || || || ||| | ||
Sbjct 205001 GCGAAGATCAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATTTTGGTCTTG 204942
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | || || | | || || || || || || | || || ||||||||
Sbjct 204941 ACGTTATCGATGGTATCAGATGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCAGAGTC 204882
Query 27231 TTCACAAAGATTTGCATA 27248
|| || ||||| ||||||
Sbjct 204881 TTGACGAAGATCTGCATA 204864
>seq10
Length=848763
Score = 95.1 bits (104), Expect = 1e-14
Identities = 276/422 (65%), Gaps = 5/422 (1%)
Strand=Plus/Plus
Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672
||||||| | || | ||||| || |||||||||||||| ||||| |||| ||| |||
Sbjct 460817 TGGGACAGAAGAGTGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCG 460876
Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCA 131732
||| || || || || ||||| | ||| |||||||| |||| | || ||
Sbjct 460877 TCCACAAAGCATAGAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCA 460936
Query 131733 AATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTT 131792
| | | || | |||||||| |||||||| || || | || | || | || ||
Sbjct 460937 AGTCAAGCCAGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGG 460996
Query 131793 TGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGG 131849
|||| || || || |||| ||||| ||| | || | ||| || |||||||| |
Sbjct 460997 GGCGCTTGTTGCCACCCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAG 461056
Query 131850 GCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTT 131909
| | |||||||| | || ||||| | |||||| ||| | || | ||
Sbjct 461057 GAATTAGACCGTTGGATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGC 461116
Query 131910 TGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGA 131968
||| ||||| || || || || || || || ||| || || | || || | | ||
Sbjct 461117 GGTGTACGTTCAGACCGATGCCACCGGCAGTCTTT-GAAATCATAGCACAGGTCTTGAGC 461175
Query 131969 GTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAAC 132028
|||| ||||| || || | ||||||| | || |||| | ||||| ||||| | |
Sbjct 461176 GTGTCGTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGC 461235
Query 132029 TG 132030
||
Sbjct 461236 TG 461237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424932499348104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |