Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq10 291 1e-73
seq15 118 1e-21
>seq10
Length=848763
Score = 291 bits (322), Expect = 1e-73
Identities = 1176/1823 (65%), Gaps = 51/1823 (3%)
Strand=Plus/Plus
Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413
|||| || || ||||||||||| || |||||||| || | ||||| | | ||||
Sbjct 459646 GCCTGTGTACGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGC 459705
Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGG 110473
|| || | || |||| ||||||||| | |||| || ||| | | || ||||
Sbjct 459706 ATGGAGGTGATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGG 459765
Query 110474 TCAATGAAGCGCCCC-CGTTGTGCCGCCATATCAATGACATC-CTTCATCTTAATTTCCC 110531
|||||||| ||| || || | || ||||| | ||||||| | | |||| ||||||
Sbjct 459766 TCAATGAA-CGCGCCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTTA-TTTCCC 459823
Query 110532 AAACTGTGCGATAGAGATTCTTGA-TATCATCTGGGATATCTGAGATATTCTGGATGGAA 110590
| || || || | || ||| | |||||||||| || | || || ||| || |||
Sbjct 459824 AGACCGTCTTGTACA-ATGCTTTAATATCATCTGGAATGTTTGGAATGCGCTGAATCGAA 459882
Query 110591 CCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGG 110650
|| ||| || | ||| | | |||||||| | ||||| | ||| || | |||
Sbjct 459883 CCACCCTCCGCAATGATGCGGTTCTTCATATTGTCAGACCACAAACCCATGTCAACGAGA 459942
Query 110651 TCATTGA----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAG 110706
|| |||| | | | | ||| ||| || |||| || ||||| | |
Sbjct 459943 TCTTTGAGCAACCAAG-GATTGACGACCTGGA---ACTCGCCGGCGAGCACGCGACGTGA 459998
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||||| || ||||| || ||||| || || ||||||| ||| || | || ||
Sbjct 459999 GTAGATGTTTGAGGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGA 460058
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824
|| |||||||| || |||| | || || ||| || | ||| | || |||||
Sbjct 460059 AGCGGTTGGCATGGGCGCCACGAGTAAGGA--GTTGCGGACACCATGCTTTTTGATCTCA 460116
Query 110825 TCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACT 110882
| ||||| |||||||| || || | |||| |||| |||| |||||||| |||
Sbjct 460117 GCTTTGAGGCTGTCCCAGTCCCAGA-GATCAGTTGGAGTCACGTTCC-ACATGTCATACT 460174
Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942
| | | ||| |||||| |||| || |||||| | | ||||| |||||| ||| |
Sbjct 460175 GCAAAATCCCCTGGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGG 460234
Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
| | ||||| || ||| | ||||| || |||||||||||||| | ||||
Sbjct 460235 CAAGCTCACACGAAGCTGTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCA 460294
Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGA 111061
| || || || || |||| | ||| ||| | | || |||| || |||
Sbjct 460295 GCATACGAGCCTCTGGAGAGTCGAATG-GCAGCCGCAGAGCGAGGAAAGCATCGGCAAGA 460353
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120
|| || ||||| | ||| ||||| | ||||| ||| ||| || || || ||| ||
Sbjct 460354 CCCTGCACACCGACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGCC-TCTGGTAC 460412
Query 111121 GGGATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGGTAACAATCTTT---GTGA 111176
|| || || |||| |||| || | | || ||| ||| | | ||||
Sbjct 460413 AGGGTAGTGGTTAATGTCGATGATCTTGTTCAAG----TTGCGAACGACATGGCGGGTGA 460468
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
||||| || || | | || | || | | ||| |||| | |||| || |
Sbjct 460469 CCTCATGCAGCTTCTTGAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGCAGAG 460528
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
| | || ||||| || || || || ||| || | |||||||| | || || |
Sbjct 460529 CCAGAGAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGG 460588
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || | |||||| || || || |||| || || ||||| ||||| |||||| |
Sbjct 460589 TGCAAAGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAG 460648
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
| ||||||||||||||| |||| | || ||||| ||||||| | ||||| || | ||
Sbjct 460649 CGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATACC 460708
Query 111417 AAA-CATCGG----CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471
| | | || | ||| |||| | | | | || |||||| |||||| ||
Sbjct 460709 ACAGCTTCTGAGCACGGATGGTCTCACGAC-----CACGGCCCTCCTTCTCGTATTTCTC 460763
Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531
||| ||||| |||||||| || || | |||| ||| || ||||| | | |||||
Sbjct 460764 GTATAGGGCCTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACA 460823
Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
||| || | ||| |||| | ||||| || |||||||| || || || ||||||
Sbjct 460824 GAAGAGTGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAA 460883
Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
| | |||||||| | | || |||||| | ||| ||||| || || |||||
Sbjct 460884 AGCATAGAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAG 460943
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707
| | | || || || |||||||||||||| || | |||| || || | |
Sbjct 460944 CCAGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTT 461003
Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| | ||| | |||| ||||| || || ||||| | | || || | ||| ||||| |
Sbjct 461004 GTTG-CCACCCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTA 461062
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 111827
||| | ||| || || || || | ||| || | | || | | || |
Sbjct 461063 GACCGTTGGATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTA 461122
Query 111828 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 111887
|| || || || || || || |||||| || ||||| | | || || | |
Sbjct 461123 CGTTCAGACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGT 461182
Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947
|||| || | || ||||||||| | |||| |||||||| ||| | ||||||
Sbjct 461183 AGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCG 461242
Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATC 112006
|| || |||||||| || || || || | ||||| |||| ||| | | |||||
Sbjct 461243 ACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAA-GTACTTATTCGACATG 461301
Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066
| |||||| ||||| | | || ||||||||||| ||||| ||||| | || || |||
Sbjct 461302 TAGTCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGC 461361
Query 112067 ATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTC 112126
|| | ||||| |||||| | || | |||||| || || |||| ||| | ||
Sbjct 461362 ATAATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTC 461421
Query 112127 TCAAGGGTTTTGAGACCAAAGTA 112149
|| | ||||||| ||||| ||
Sbjct 461422 TCCAATGTTTTGAAGCCAAAATA 461444
>seq15
Length=603150
Score = 118 bits (130), Expect = 1e-21
Identities = 300/453 (66%), Gaps = 10/453 (2%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || |||||||| ||||| || ||||| || | || ||||| |||||
Sbjct 376347 TAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTCCATG 376288
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA----TGGGTGGCACCCCAACTTGTTTGAGGAG 122486
||||| || || ||| ||||||| | | || || || | | |||| |
Sbjct 376287 AAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGC----CGAGAGCCATGAGCAA 376232
Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546
|| || | ||| |||||||||||| | |||| || | |||||||||| |||
Sbjct 376231 GCGGTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCATTCATACCGAGCAGGCG 376172
Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606
|| || || || || || |||| ||||||| || || ||||| | | ||||||
Sbjct 376171 GCAAGGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGATGGC 376112
Query 122607 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTC 122666
| | | || | || || |||| | | | |||||||| ||| || ||
Sbjct 376111 ACGCACCGACTCTGGAGACGGCTTATTTTGAATCATGCTGAAGAGCAGGCAGGCGAAGTC 376052
Query 122667 CTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAG 122726
||| | |||||| || || ||||| || || || |||||| | || ||||||||
Sbjct 376051 GGTGTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGCATGAG 375992
Query 122727 ACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785
||| |||||||| | ||| | || | ||| || | || ||||||||||| |||||||
Sbjct 375991 ACCTCGCTTCTTAAGCCAGAAGATGGAAGCA-AAGGCACCAGAGAAGAAGATGCCCTCCA 375933
Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
| || || || | |||||| ||||||||
Sbjct 375932 CGGCAGCGAAGGCGATGAGGCGTGAGGCGAAGG 375900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029118903200
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