Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq10 262 5e-65
seq15 125 9e-24
>seq10
Length=848763
Score = 262 bits (290), Expect = 5e-65
Identities = 1174/1825 (64%), Gaps = 55/1825 (3%)
Strand=Plus/Plus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
|||| || || || |||||||| || |||||||| || |||||||| || | ||||
Sbjct 459646 GCCTGTGTACGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGC 459705
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947
|| |||| | |||| | ||||| | |||| || ||| | | ||||||||
Sbjct 459706 ATGGAGGTGATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGG 459765
Query 117948 TCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATC-CTTCATCTTGATTTCCC 118005
|| ||||| ||| || ||||| || ||||| | || |||| | | ||| |||||||
Sbjct 459766 TCAATGAACGCG-CCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTT-ATTTCCC 459823
Query 118006 ACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATC 118065
| || ||| |||| | |||||||||||||| || | || || || || |
Sbjct 459824 AGACCGTCTTGTACAATGCTTTAATATCATCTGGAATGTTTGGAATGCGCTGAATCGAAC 459883
Query 118066 CACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGAT 118125
||||| || | ||| | | |||||||| | ||||| | ||| || | |||||
Sbjct 459884 CACCCTCCGCAATGATGCGGTTCTTCATATTGTCAGACCACAAACCCATGTCAACGAGAT 459943
Query 118126 CCT----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAG 118180
| | | || | | | |||||| || ||||| || ||||| ||| | | ||
Sbjct 459944 CTTTGAGCAACCA-AGG---ATTGACGACCTGGAACTCGCCGGCGAGCACGCGACGTGAG 459999
Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240
||||| || | || |||||||| |||||||| |||||||||| ||| || | || ||
Sbjct 460000 -TAGATGTTTGAGGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAGTTGA 460058
Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCCCTAATGCG 118297
|| || |||||||| |||| ||| | | ||| |||| ||| ||||| | ||
Sbjct 460059 AGCGGTTGGCATGGGCGCCACGAGTAAGGAGTTGCGGACACCATGCTTTT---TGATCTC 460115
Query 118298 TTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC-TTTGTCTCCCCCTGCCACATATCAAACT 118356
| ||||| ||||||||| || || | ||| | | | |||||| ||| |||
Sbjct 460116 AGCTTTGAGGCTGTCCCAGTCCCAG-AGATCAGTTGGAGTCACGTTCCACATGTCATACT 460174
Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416
| | || || |||||| | ||||| |||||| | || ||| || || | | | |
Sbjct 460175 GCAAAATCCCCTGGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGG 460234
Query 118417 CCA----ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472
| | | || |||| | || || ||||| || || |||||||| || |
Sbjct 460235 CAAGCTCACACGAAGCTGTC----AGAGCGGCGTGGTATATGGTTTCAAAGATTTGGATG 460290
Query 118473 TTCATTGCCT--TGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCC 118529
|||| || | ||||| || || || | || | ||| | | || ||||
Sbjct 460291 TTCA--GCATACGAGCCTCTGGAGAGTCGAATGGCAG-CCGCAGAGCGAGGAAAGCATCG 460347
Query 118530 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTC 118589
|| ||||| || ||||||| || || || || |||||||| ||| || || || ||
Sbjct 460348 GCAAGACCCTGCACACCGACACCGATAGGACGGTGTCTCATGTTACTGTTACGTGC-CTC 460406
Query 118590 T-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 118648
| || || || || | ||||| | | | || | || |||| ||
Sbjct 460407 TGGTACAGGGTAGTGGTTAATGTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGGGT 460466
Query 118649 GATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 118708
|| ||||| ||||| | | | || | || | | ||| |||| | | || ||
Sbjct 460467 GACCTCATGCAGCTTCTTGAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGCAG 460526
Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768
|| | || |||| |||||||| | | ||| || |||||||||| || || ||
Sbjct 460527 AGCCAGAGAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTC 460586
Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 118828
||||| | ||| || || ||||| |||| ||| || || || ||| ||| ||
Sbjct 460587 GGTGCAAAGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCA 460646
Query 118829 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 118888
|| |||||||| |||||| | || | || ||||| || || | || ||||| || |
Sbjct 460647 AGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATA 460706
Query 118889 CCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGT 118947
||| | | || | ||| | | || | | || ||||| | |||||| || ||
Sbjct 460707 CCACAGCTTCTG-AGCACGGATGGTCTCACGACCACGGCCCTCCTTCTCGTATTTCTCGT 460765
Query 118948 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 119007
| ||||| ||||||||||| || | | || | ||| || ||||| | || || ||||
Sbjct 460766 ATAGGGCCTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGA 460825
Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067
|||| | ||| |||| || ||||| || |||||||| || || || |||| | |
Sbjct 460826 AGAGTGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAG 460885
Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
| |||||||||| ||| || ||||| | || || || ||||| || |
Sbjct 460886 CATAGAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCC 460945
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTAC 119181
|| | | || || || ||||| || || ||||| | |||| | || | |||
Sbjct 460946 AGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTT-- 461003
Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
| | ||| |||| | ||||| | || ||||| | | ||||| | ||| ||||| |
Sbjct 461004 GTTG-CCACCCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTA 461062
Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTG 119299
||| | |||| ||| || || || | || ||||| || | | || | | |||
Sbjct 461063 GACCGTTGGATGTGCCGTTGGTACCACCAATGTACGA-AC-CAGTCGCACGAATGCGGTG 461120
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
| || || ||| || || || || |||||| || || || | |||| || |
Sbjct 461121 TACGTTCAGACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTC 461180
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
|||||| || || || ||| |||| | |||||||||||||| || | || ||
Sbjct 461181 GTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGG 461240
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478
| || || ||||| || || ||||| || | |||||| |||| ||| | | ||||
Sbjct 461241 CGACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAA-GTACTTATTCGACA 461299
Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538
| | |||||| ||||| | | | ||||||||| ||||| || || | || || |
Sbjct 461300 TGTAGTCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACAC 461359
Query 119539 GCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCT 119598
|||||| ||||| || ||| | || || | |||| || | | ||||| |
Sbjct 461360 GCATAATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACC 461419
Query 119599 TCTCCAAGGTCTTGAGACCAAAATA 119623
||||||| || |||| ||||||||
Sbjct 461420 TCTCCAATGTTTTGAAGCCAAAATA 461444
>seq15
Length=603150
Score = 125 bits (138), Expect = 9e-24
Identities = 290/437 (66%), Gaps = 0/437 (0%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| |||||||||||||| |||||||| || ||| ||| ||||||||
Sbjct 376347 TAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTCTCCATG 376288
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGA 129847
|| || || |||||| | | ||| | | || || | |||| | ||
Sbjct 376287 AAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGCCGAGAGCCATGAGCAAGCGG 376228
Query 129848 TCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACAT 129907
|| | || |||||||||||| |||| || | |||||||||| ||| ||
Sbjct 376227 TCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCATTCATACCGAGCAGGCGGCAA 376168
Query 129908 GGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGA 129967
|| || || || || |||| | ||||| ||| ||||| || | |||||| |
Sbjct 376167 GGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGATGGCACGC 376108
Query 129968 ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGG 130027
| | ||| | || |||| | | | ||||||| ||| || || |
Sbjct 376107 ACCGACTCTGGAGACGGCTTATTTTGAATCATGCTGAAGAGCAGGCAGGCGAAGTCGGTG 376048
Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087
|| | ||||||||| || || ||||| || || |||||| || || |||||||||||
Sbjct 376047 TGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGCATGAGACCT 375988
Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147
|||||||| | |||||| || | | ||| | |||||||||||||| ||||||||
Sbjct 375987 CGCTTCTTAAGCCAGAAGATGGAAGCAAAGGCACCAGAGAAGAAGATGCCCTCCACGGCA 375928
Query 130148 GCGAACGCAAAGAGACG 130164
||||| || | ||| ||
Sbjct 375927 GCGAAGGCGATGAGGCG 375911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432362928520
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