Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq10 286 4e-72
seq15 118 1e-21
seq29 86.0 7e-12
>seq10
Length=848763
Score = 286 bits (316), Expect = 4e-72
Identities = 1172/1811 (65%), Gaps = 45/1811 (2%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGTGTCTTGATG 104215
|||||||| ||||||| | |||| | ||| |||| || || |||| ||
Sbjct 461444 TATTTTGGCTTCAAAACATTGGAGAGGTCCTACCTTCTCCGAATCAATGGCAAGGTGGCA 461385
Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275
|| | |||||| ||||| | ||||| || || | || || || || |||||||||||
Sbjct 461384 GAGAGACCACAGCACATGATTATGCGTGTTGCGGTTGGCATACACGGTGAAGACATTGAG 461325
Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334
|| | | ||||| |||||| | ||||| | | ||| |||| ||||| | || ||
Sbjct 461324 AGTGCCATTGAGACTTACGACTACATGTCGAATAAGTAC-TTCACACACGCGTCTCCCAC 461266
Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394
|| || |||||||| || || || || | ||| |||||||| |||| | ||
Sbjct 461265 TCTGTTTAATGCTGGCACGCCGTCGCCGCAGCTCTCCTCCTGCTTCCTCATCGATATGAA 461206
Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454
||||||| || | || ||||| | || || | | ||||| || ||||||
Sbjct 461205 GGAGGACAGCATAGAGGGCATCTACGACACGCTCAAGACCTGTGCTATGATTTCAAAGAC 461146
Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
|| || || || || || || | || | | || | | || ||| | ||
Sbjct 461145 TGCCGGTGGCATCGGTCTGAACGTACACCGCATTCGTGCGACTGGTTCGTACATTGGTGG 461086
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| || || ||| | ||| | ||||| ||| | || || | | ||||| || ||
Sbjct 461085 TACCAACGGCACATCCAACGGTCTAATTCCTATGTTGCGTGTCTACGATGCCACCGCTCG 461026
Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630
||||| |||| | ||| | | | | || || |||| | || ||||||||||
Sbjct 461025 ATATGTTGATCAGGGTGG-CAACAAGCGCCCCGGTGCTTTCGCCATTTACCTTGAGCCAT 460967
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| || || || | | | ||||| ||||| ||||| ||| | || || | |
Sbjct 460966 GGCATGCTGACATTTTTGGCTGGCTTGACTTGCGCAAGAACCACGGTAAGGAAGA-GAAC 460908
Query 104691 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
|||| || |||||||||| ||| | |||| || ||||| |||||||| |||||||
Sbjct 460907 CGTGCTCGTGATCTCTTCTATGCTTTGTGGACGCCTGATCTGTTCATGAAACGAGTTGAA 460848
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
||| ||| | ||| | ||||| ||||| | | |||||||| ||| |||||| |
Sbjct 460847 CAGAATGGTATGTGGACACTCTTCTGTCCCAATGAAGCACCTGGCCTCGCCGATGTCTAC 460788
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869
|| || |||||||| ||||| ||| || |||||| | || || || | || |||
Sbjct 460787 GGCGAAGAGTTTGAGGCCCTATACGAGAAATACGAGAAGGAGGGCCGTGGTCGTGAGACC 460728
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
| | ||| | || | ||||| | || ||||| || | || ||||||||||| | ||
Sbjct 460727 ATCCGTGCT-CAGAAGCTGTGGTATGCCATTCTTCAGGCACAGACCGAGACTGGCAATCC 460669
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||||| ||||| ||||| || |||| ||||| || || || || |||| ||
Sbjct 460668 CTTCATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAAAACCTGGGAACCAT 460609
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
| || ||||| || || || || ||| | || | || | | ||| ||| || ||
Sbjct 460608 CCGCAGCTCCAACCTTTGCACCGAGATCATTGAGTACACTGCCCCAGACGAGGTCGCGGT 460549
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT-CCA---GAGACAAAGACAT 105104
||||||| | || || | ||||| || | | ||| ||| || | | | || ||
Sbjct 460548 GTGTAACTTGGCCTCTCTGGCTCTGCCAACCTTTGTCGATGTCATGCGTGGCGAATAC-- 460491
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
|| | | || || || || || || |||| ||| | |||| | |
Sbjct 460490 --GACTTCAAGAAGCTGCATGAGGTCACCCGCCATGTCGTTCGCAACTTGAACAAGATCA 460433
Query 105165 TTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
| || | || ||||| || ||| || ||||| ||| ||||||||||||||
Sbjct 460432 TCGACATTAACCACTACCCTGTACCAGA-GGCACGTAACAGTAACATGAGACACCGTCCT 460374
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 105282
|| ||| ||||||| |||||||| || |||| ||| | || || || | |||| ||
Sbjct 460373 ATCGGTGTCGGTGTGCAGGGTCTTGCCGATGCTTTCCTCGCTCTG-CGGCTGCCATTCGA 460315
Query 105283 TTCCGACGAAG--CGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| || | || | | | || | || ||||| ||||| || |||||||||
Sbjct 460314 CTCTCCAGAGGCTCGTATG--CTGAACATCCAAATCTTTGAAACCATATACCACGCCGCT 460257
Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|| || | ||| | || | | | ||||| ||| | | |||||| ||
Sbjct 460256 CTGACAGCTTCGTGTGAGCTTGCCAAAGAGCAAGGTCCCTATTCGAGTTATGAGGGCTCG 460197
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACT 105458
|| | || || ||| | | || | ||| |||| |||| |||| |||| || || ||
Sbjct 460196 CCCGTGTCCCAGGGGATTTTGCAGTATGACATGT-GGAACGTGACTCCAA-CTGATCTCT 460139
Query 105459 ACGACTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517
|||||||| ||| ||||| | ||||| || | ||| | || ||| | |||
Sbjct 460138 GGGACTGGGACAGC-CTCAAAGCTGAGATCAAAAAGCATGGTGTCCGCAACTCCTTACTC 460080
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
|||| || |||||||| || || || | || ||| ||||||| || || ||||| ||
Sbjct 460079 GTGGCGCCCATGCCAACCGCTTCAACTTCTCAGATCCTGGGTAACAACGAGTGCTTCGAG 460020
Query 105578 CCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
|| || || | |||||||| || | | | ||||| || ||||| | | |||||
Sbjct 460019 CCATATACCTCAAACATCTA-CTCACGTCGCGTGCTCGCCGGCGAGTTCCAGGTCGTCAA 459961
Query 105637 --CAAGCAT-CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 105693
| | | ||| | || ||| || || ||| | ||||| | |||||||| |
Sbjct 459960 TCCTTGGTTGCTC---AAAGATCTCGTTGACATGGGTTTGTGGTCTGACAATATGAAGAA 459904
Query 105694 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAA 105753
| ||| | | ||||||||| ||||| ||| | |||||| |||| |||||
Sbjct 459903 CCGCATCATTGCGGAGGGTGGTTCGATTCAGCGCATTCCAAACATTCCAGATGATATTAA 459844
Query 105754 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAG-GATGTCATTGACATGGCCGCAG 105812
|||||| || || |||||||| ||| | | ||||||| | |||||||| |
Sbjct 459843 AGCATTGTACAAGACGGTCTGGGAAAT-AAGCCAACGCCATGTCATCCAGATGGCCGCCG 459785
Query 105813 ATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACG 105871
||||||| ||| |||||||| ||| || | | || || |||| | ||||||
Sbjct 459784 ATCGTGG-CGCGTTCATTGACCAATCCCAGTCTCTCAACATCCACATGAAGGAACCAACG 459726
Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931
||| |||| || | || ||||| | | |||||| |||||||| || || |||
Sbjct 459725 ATGGGCAAGATCACCTCCATGCATTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGGCATG 459666
Query 105932 TATTACCTCCG 105942
|| || || ||
Sbjct 459665 TACTATCTGCG 459655
>seq15
Length=603150
Score = 118 bits (130), Expect = 1e-21
Identities = 295/441 (67%), Gaps = 8/441 (2%)
Strand=Plus/Plus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865
|| ||| |||| || || || ||||| ||||||||||||||| |||| ||| | ||
Sbjct 375911 CGCCTCATCGCCTTCGCTGCCGTGGAGGGCATCTTCTTCTCTGGTGCCTT-TGCTTCCAT 375969
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
| ||||| |||||||||||||||||||| || | ||||||||||||||| || ||
Sbjct 375970 CTTCTGGCTTAAGAAGCGAGGTCTCATGCCGGGCTTGACCTTCTCCAACGAGCTCATTTC 376029
Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCA-AATTATTGCGTATTA 94984
|| |||||||| | ||| || || || || |||| || ||| | | ||
Sbjct 376030 ACGCGACGAGGGTATGCACACCGACTTCGCCTGCCTGCTCTTCAGCATGATT-CAAAATA 376088
Query 94985 AACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGAT 95044
| || | | ||| | | | | | || | | || || || || ||||||| |
Sbjct 376089 AGCCGTCTCCAGAGTCGGTGCGTGCCATCATCACCGAGGCTGTCTCCATCGAGAAAGAGT 376148
Query 95045 TCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAAT 95104
|| | || ||||| || ||| || ||||||||||| | || |||| | |
Sbjct 376149 TCCTCACCGAAGCCCTGCCTTGCCGCCTGCTCGGTATGAATGCAGACCTTATGTGCCAGT 376208
Query 95105 ATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAA--TTTGGAA 95162
| ||||||| |||| | || | ||| | | | | || || | | || | | ||
Sbjct 376209 ACATTGAGTTTGTAGCAGACCGCTTGCTCATG--GCTCTCGGCAACACAAAGGTGTACAA 376266
Query 95163 CTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTT 95222
| | | ||| || || ||||||||||||||||| || | || |||||||| |||||
Sbjct 376267 CGCGACGAACCCGTTCGACTTCATGGAGAACATCTCGCTGGCAGGCAAGACAAATTTCTT 376326
Query 95223 CGAAAAGAGGGTTGGGGACTA 95243
||| ||| | ||||| |||||
Sbjct 376327 CGAGAAGCGCGTTGGCGACTA 376347
>seq29
Length=351414
Score = 86.0 bits (94), Expect = 7e-12
Identities = 159/228 (70%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGA 9761
|||||| || ||||||||||| | |||||| ||| || ||||| ||||| | || |
Sbjct 320014 GGCATCGATTTCATCAATGAATATGATGCAAGGTGTGTTTTTC-CGAGCTGTCGCGAACA 320072
Query 9762 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 9821
||| || |||||| | || || || || ||||| || ||||| | | | | ||
Sbjct 320073 AATCTCGAACACGCGATGGACCAACTCCGACGAACATTTCAACAAATTCAGAACCAG-AC 320131
Query 9822 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880
| | || ||| || ||| ||||| |||||| | ||| || ||||| || ||||||
Sbjct 320132 ACGGAGAAGAATGGCACACCTGATTCTCCCGCAGTAGCTTTTGCCAGAAGTGTTTTACCC 320191
Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928
|| ||||| || | | || |||||| || |||||||| || |||
Sbjct 320192 GTTCCTGGAGGTCCAGACAAGATGGCACCGCGGGGAATCTTTGCTCCA 320239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258124291080
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