Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq23 188 8e-43
seq10 178 1e-39
seq2 132 5e-26
seq9 107 2e-18
>seq23
Length=461238
Score = 188 bits (208), Expect = 8e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || ||||| || || |||||||| |||||| |
Sbjct 204865 ATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACGCTTGAGGTCGAGTCATCT 204924
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | |||||||||||||||||||| || || |||||||||
Sbjct 204925 GATACCATCGATAACGTCAAGACCAAAATTCAGGACAAGGAGGGCATCCCACCAGACCAG 204984
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || |||||||| || ||||| |||| ||||| || | ||||| |||
Sbjct 204985 CAGCGCCTGATCTTCGCTGGTAAACAGCTCGAAGATGGCCGTACTCTGTCTGACTACAAT 205044
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || ||||| || || || | ||||||||||| ||
Sbjct 205045 ATTCAAAAGGAGTCTACTCTGCACCTTGTGCTACGTCTTCGCGGAGG 205091
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || |||||||| || || ||||| || || || || ||||| ||
Sbjct 205093 ATGCAAATTTTCGTGAAGACGCTCACAGGAAAGACGATCACCCTAGAAGTTGAATCCTCA 205152
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| ||||| | || ||||| ||||||||||| ||||| ||||| |||
Sbjct 205153 GACACGATTGACAATGTGAAGACCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 205212
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || |||||||||||||| ||||||| ||| || || ||||||| ||
Sbjct 205213 CAGCGCTTGATCTTCGCTGGTAAGCAACTGGAGGATGGTCGCACGCTGTCAGACTACAAC 205272
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| |||||||| || ||||| || | || | ||||| || || || ||
Sbjct 205273 ATTCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGCGGTCA 205322
Score = 104 bits (114), Expect = 3e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||| ||||| || | ||| | ||| | ||| |
Sbjct 204487 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAATGTTAAGACC 204546
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| || || |||||||||||||| || || || ||||||||
Sbjct 204547 AAGATTCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGCCTGATCTTCGCTGGTAAA 204606
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||||| || | || || || | ||||| ||
Sbjct 204607 CAGCTCGAAGACGGCCGCACTCTGTCCGACTACAA 204641
>seq10
Length=848763
Score = 178 bits (196), Expect = 1e-39
Identities = 1112/1766 (63%), Gaps = 69/1766 (4%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || ||||||||||||||||| |||||||| || ||||||||| | |||
Sbjct 459646 GCCTGTGTACGCAGATAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAATGC 459705
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| || ||| ||| | | || || | || |||| |||||| |||||||| || ||
Sbjct 459706 ATGGAGGTGATCTTGCCCATCGTTGGTTCCTTCATGTGGATGTTGAGAGACTGGGATTGG 459765
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTCCCA 80210
||||| || |||||||| || ||||| | || | || | || | | |||||||
Sbjct 459766 TCAATGAACGCGCCACGATCGGCGGCCATCTGGATGACATGGCGTTGGCTTA-TTTCCCA 459824
Query 80211 TACTGTACGATACAC--CTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTG--- 80265
|| || |||| ||| || || |||||||||| || | || | |
Sbjct 459825 GACCGTCTTGTACAATGCTTT--AATATCATCTGGAATGTTTGGAATGCGCTGAATCGAA 459882
Query 80266 CCACCGTCCTTTACAATTTGATTTTTCA-ATT--CAGACGTCCAGACACCAAGCTTGTGC 80322
||||| ||| | || | || |||| ||| ||||| || | ||| | |
Sbjct 459883 CCACCCTCCGCAATGATGCGGTTCTTCATATTGTCAGAC---CACAAACCCATGTCAACG 459939
Query 80323 AGATCTTTCA-----CAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGAC 80377
|||||||| | ||||| ||| | | || |||| || ||||| |||||
Sbjct 459940 AGATCTTTGAGCAACCAAGGA--TTGACGACCTGGA---ACTCGCCGGCGAGCACGCGAC 459994
Query 80378 GCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCG 80437
| || | ||||| || || ||||| || ||||||||| || |||||||||| |
Sbjct 459995 GTGAGTAGATGTTTGAGGTATATGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGAAG 460054
Query 80438 TGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT 80497
| || || ||||| || | || | | || || || | || ||||| ||||| |
Sbjct 460055 TTGAAGCGGTTGGCATGGGCGCCACGAGTAAGGAGTTGCGGACACCATGCTTTTTGATCT 460114
Query 80498 CCTC---GCGCAAATCTGA---CCAAAAATCAACCCCAACGCTGTGACC--CCACATGTC 80549
| | | | || | ||| | |||| | || || |||||||||
Sbjct 460115 CAGCTTTGAGGCTGTCCCAGTCCCAGAGATCAGTTGGA-----GTCACGTTCCACATGTC 460169
Query 80550 GTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGT 80609
| |||||| || |||| ||| | || || ||| | | || || || || | |
Sbjct 460170 ATACTGCAAAATCCCCTGGGACACGGGCGAGCCCTCATAACTCGAATAGGGACCTTGCTC 460229
Query 80610 CTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTT 80669
||||| ||||||||||| | | || || ||||| || ||| ||||||| |
Sbjct 460230 TTTGGCAAGCTCACACGAAGCTGTCAGAGCGGCGTGGTATATGGTTTCAAAGATTTGGAT 460289
Query 80670 GTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGC 80729
||||| || |||| ||| |||||| | || | || | ||| | || ||
Sbjct 460290 GTTCAGCATACGAGCCTCTGGAGAGTCGAATGGCAGCCGCAGAGCGAGGAAAGCATCGGC 460349
Query 80730 CAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCT-CG-GCCTCC 80787
|| ||||| || |||| |||| || ||||| | | |||| | | | || |||||
Sbjct 460350 AAGACCCTGCACACCGACACCGATAGGACGGTGTCTCATGTT--ACTGTTACGTGCCTCT 460407
Query 80788 GGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA 80847
|| | ||||| |||| | ||||||| ||||| |||||| ||| || ||
Sbjct 460408 GGTACAGGGTAGTGGTTAATGTCGATGATCTTGTTCAAGTTGCGAACGACATGGCGGGTG 460467
Query 80848 ACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACA------AATGCCGGAAGG 80901
|| ||||| || |||| |||||| ||| | | | | ||| || | || ||
Sbjct 460468 ACCTCATGCAGCTTCTTGAAGTCGTATTCGCCACGCATGACATCGACAAAGGTTGGCAGA 460527
Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCC 80961
||| || |||| || ||||| || ||||| || | | || |||| | ||| ||
Sbjct 460528 GCCAGAGAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCG 460587
Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAA 81021
||||| | || || || || ||||||||||||||||| |||| |||||||
Sbjct 460588 GTGCAAAGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAA 460647
Query 81022 GCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCC 81081
|||||||||||| |||| | || | || |||||| ||||| || || ||||| | |
Sbjct 460648 GCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATAC 460707
Query 81082 CAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAA 81141
|| | || | || || || || ||| || | | || || ||||
Sbjct 460708 CACAGCTTCTGAGCACGGATGGTCTCACGACCACGGCCCTCCTTCTCGTATTTCTCGTAT 460767
Query 81142 GCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATC 81201
| || |||| | |||| | || | |||| | || || || || || |
Sbjct 460768 AGGGCCTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAG 460827
Query 81202 AGGTGCCAGTCGGTGTCGTTCTCTACAGC---CTTCATGAAAGCGTCAGGGATCCAGAGG 81258
|| ||| | | |||| | || | |||||||| ||||| |||| |
Sbjct 460828 AGTGTCCA---CATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAA 460884
Query 81259 GCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317
|| ||| || || || ||| || ||| || | ||| ||||| |||||| || ||
Sbjct 460885 GCATAGAAGAGATCACGAGCA-CGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAG 460943
Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG--- 81374
|| | | ||||| |||||||||||||| || || | ||||| | || |||
Sbjct 460944 CCAGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTT 461003
Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
||||||||| | || || || || || || | | |||||||||||||| || |
Sbjct 461004 GTTGCCACCCTGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAG 461063
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT 81494
||| | || ||||| ||||| | || ||| || | || || | ||| |
Sbjct 461064 ACCGTTGGATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAA---TGCGG-- 461118
Query 81495 TGAA-----AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTC 81549
|| | |||||||||||||| | |||||||||| |||||| || | ||
Sbjct 461119 TGTACGTTCAGACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTG 461178
Query 81550 TCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGA 81609
|| || || ||||| ||||| || | ||||| || | | ||| ||| || | |||
Sbjct 461179 TCGTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGC 461238
Query 81610 GGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGAC 81669
|| | ||| ||||| ||||| || || | |||||| |||| || || |||
Sbjct 461239 GGCGACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGAC 461298
Query 81670 ATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACA 81729
|| ||| || || || || | | ||| || |||||||| || || | || |||
Sbjct 461299 ATGTAGTCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACA 461358
Query 81730 CGCATAAACATGTACTGGGGCGTCTC 81755
||||||| ||||| ||| || ||||
Sbjct 461359 CGCATAATCATGTGCTGTGGTCTCTC 461384
>seq2
Length=1312579
Score = 132 bits (146), Expect = 5e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||| || | ||| || ||||| || || ||||||||||| || |||||||| |||||
Sbjct 554678 AATTCATAGCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 554619
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | ||| ||||| | || || |||||||| ||||| || || ||||||||
Sbjct 554618 GGATACGATCGACAATGTGAAGACCAAGATCCAGGACAAAGAGGGTATCCCACCAGACCA 554559
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| | || |||||||| ||||| || || |||| || |||||| ||||| ||
Sbjct 554558 GCAGCGCTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTAAGCGACTACAA 554499
Query 27585 TGTCCAAAAGG 27595
|||| ||||
Sbjct 554498 CATCCAGAAGG 554488
>seq9
Length=905162
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| ||||| || |||||||||||||| || || || || |||||||| |||
Sbjct 60770 GACAAGGAGGGTATTCCACCCGACCAGCAGCGTCTTATCTTCGCCGGCAAGCAACTTGAG 60829
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || || | | ||||| || |||||||||| || || || || || ||| |
Sbjct 60830 GATGGCCGCACTTTGTCCGACTACAACATCCAAAAGGAGTCGACGCTGCACCTTGTCCTT 60889
Query 27619 CGTCTTCGCGGTGG 27632
|| ||||| |||||
Sbjct 60890 CGACTTCGTGGTGG 60903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307783701040
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