Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 >seq8 Length=997024 Score = 134 bits (148), Expect = 1e-26 Identities = 233/339 (69%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 ||||||||| |||| || ||||||||||| || | || |||||| ||| || | Sbjct 376790 GGGGTTCCACGCGCTCAGGATGATGCGCCGATCGTACGGCTTGTTCTTGAGCTTATCGAT 376731 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237 ||| ||||| ||||| ||| ||||| || || | | ||| |||||| Sbjct 376730 CACGTCCGCGAGCTGGTCCACACCCTGCCCCGTATAATCCGTATGCGCGTCGACGTACTC 376671 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 |||||||| || | ||||||||| || || || || || ||||| |||||||| ||||| Sbjct 376670 CGCTCCGAAGTGACGCCACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTG 376611 Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | ||| || | ||| | || |||| | || ||| ||||||||||||| | || Sbjct 376610 CCCGAGACCGTTGGCGTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCC 376551 Query 30358 CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 || || |||||| ||| ||| || || ||| | |||||| |||||||| | | Sbjct 376550 CTGTTCTGAGAGCGGTTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGCAAT 376491 Query 30418 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||| || || || | |||||||||||| ||||| Sbjct 376490 GACTGCGCGGAGGAACACGCGCTTGGTCGTGAGAAGGGG 376452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308582649764