Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq23 89.7 4e-13
>seq23
Length=461238
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|||| ||| | || || || ||| ||||| ||||| || || | || || || |
Sbjct 205079 CGTAGCACAAGGTGCAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAGAGTACGGCCA 205020
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188
|| || |||||||| || || || || || ||||||||||| |||||| | || ||| ||
Sbjct 205019 TCTTCGAGCTGTTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGG-ATGCCCTCCTT 204961
Query 39189 GTCCATGATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| ||| || |||| | | | ||||| ||||| || || | |||||
Sbjct 204960 GTCC-TGAATTTTGGTCTTGACGTTATCGATGGTATCAGATGACTCGACCTCAAGCGTGA 204902
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| | ||||| ||||| || || || ||||| |||||
Sbjct 204901 TGGTCTTTCCAGTCAGAGTCTTGACGAAGATCTGCAT 204865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543678723071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |