Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq23 89.7 4e-13 >seq23 Length=461238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| ||| | || || || ||| ||||| ||||| || || | || || || | Sbjct 205079 CGTAGCACAAGGTGCAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAGAGTACGGCCA 205020 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188 || || |||||||| || || || || || ||||||||||| |||||| | || ||| || Sbjct 205019 TCTTCGAGCTGTTTACCAGCGAAGATCAGGCGCTGCTGGTCTGGTGGG-ATGCCCTCCTT 204961 Query 39189 GTCCATGATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| || |||| | | | ||||| ||||| || || | ||||| Sbjct 204960 GTCC-TGAATTTTGGTCTTGACGTTATCGATGGTATCAGATGACTCGACCTCAAGCGTGA 204902 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | ||||| ||||| || || || ||||| ||||| Sbjct 204901 TGGTCTTTCCAGTCAGAGTCTTGACGAAGATCTGCAT 204865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543678723071