Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 7e-16
>seq2
Length=1312579
Score = 98.7 bits (108), Expect = 7e-16
Identities = 138/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 23609 AAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCA 23668
|||| || | ||||| || ||||||||||| || || ||||| || || || || ||
Sbjct 554679 AAATTCATAGCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGT 554620
Query 23669 CGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | || ||| | || || || || |||||||| ||| | || |||||
Sbjct 554619 CGGATACGATCGACAATGTGAAGAC-CAAGATCCAGGACAAAGAGGGTATCCCACCAGAC 554561
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| || || ||||| ||||| || || ||||| | ||||| || |||| |||
Sbjct 554560 CAGCAGCGCTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTAAGCGACTAC 554501
Query 23788 AACATACAAAA 23798
||||| || ||
Sbjct 554500 AACATCCAGAA 554490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008088146436
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