Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 8e-16 >seq8 Length=997024 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| || | ||||||||| || || || || || ||||| |||||||| |||||| ||| Sbjct 376665 CGAAGTGACGCCACTGGAAACCATATACGGGACCGAGGTCGCCCTCTTCTCTGTGCCCGA 376606 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 || | ||| | || |||| | || ||| ||||||||||||| | |||| | Sbjct 376605 GACCGTTGGCGTCGAGGAACTCTCGGCTCCCATTGCCGTCCCAGATCTTGATGCCCTGTT 376546 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 | |||||| ||| ||| || || ||| | |||||| |||||||| | | ||| | Sbjct 376545 CTGAGAGCGGTTTCGAGGACGTCGAGCCTGCTATGAACCAGAGCAGCTCTGCAATGACTG 376486 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | || || | |||||||||||| ||||| Sbjct 376485 CGCGGAGGAACACGCGCTTGGTCGTGAGAAGGGG 376452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161383308162