Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq15 122 7e-23 >seq15 Length=603150 Score = 122 bits (134), Expect = 7e-23 Identities = 294/437 (67%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| ||| || ||||| ||||||||||| || |||||| | | ||| || || Sbjct 376353 TTCTGGTAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTC 376294 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| || || ||||| || || |||||||| | ||| | | ||||| | || Sbjct 376293 TCCATGAAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGC-CGAGAGCCATGAG 376235 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTA 4434 ||| ||||| |||||||| || || ||||||| ||| || || ||| || || || | | Sbjct 376234 CAAGCGGTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCA-TTCATACCGAGCA 376176 Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | ||| || || | || | ||||||| || || | || || || ||||| | Sbjct 376175 GGCGGCAAGGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGA 376116 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT-CCAAACAATAAACACGCA 4553 | | | ||| ||| || |||||| || || | || | | || || Sbjct 376115 TGGCACGCACCGACTCTGGAGACGGCTTATTT-TGAATCATGCTGAAGAGCAGGCAGGCG 376057 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || |||| ||| ||||| | ||| || ||||| || || || || || ||| Sbjct 376056 AAGTCGGTGTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGC 375997 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | ||||| ||| |||||||| || || | ||||| | ||||| ||||| ||||| Sbjct 375996 ATGAGACCTCGCTTCTTAAGCCAGAAGATGGAAGCAAAGGCACCAGAGAAGAAGATGCCC 375937 Query 4674 TCTACGGCGGCAAACGC 4690 || ||||| || || || Sbjct 375936 TCCACGGCAGCGAAGGC 375920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047689887211