Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq15 122 7e-23
>seq15
Length=603150
Score = 122 bits (134), Expect = 7e-23
Identities = 294/437 (67%), Gaps = 6/437 (1%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| ||| || ||||| ||||||||||| || |||||| | | ||| || ||
Sbjct 376353 TTCTGGTAGTCGCCAACGCGCTTCTCGAAGAAATTTGTCTTGCCTGCCAGCGAGATGTTC 376294
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAG 4375
||||| || || ||||| || || |||||||| | ||| | | ||||| | ||
Sbjct 376293 TCCATGAAGTCGAACGGGTTCGTCGCGTTGTACACCTTTGTGTTGC-CGAGAGCCATGAG 376235
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTA 4434
||| ||||| |||||||| || || ||||||| ||| || || ||| || || || | |
Sbjct 376234 CAAGCGGTCTGCTACAAACTCAATGTACTGGCACATAAGGTCTGCA-TTCATACCGAGCA 376176
Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| ||| || || | || | ||||||| || || | || || || ||||| |
Sbjct 376175 GGCGGCAAGGCAGGGCTTCGGTGAGGAACTCTTTCTCGATGGAGACAGCCTCGGTGATGA 376116
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTAT-CCAAACAATAAACACGCA 4553
| | | ||| ||| || |||||| || || | || | | || ||
Sbjct 376115 TGGCACGCACCGACTCTGGAGACGGCTTATTT-TGAATCATGCTGAAGAGCAGGCAGGCG 376057
Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
|| || |||| ||| ||||| | ||| || ||||| || || || || || |||
Sbjct 376056 AAGTCGGTGTGCATACCCTCGTCGCGTGAAATGAGCTCGTTGGAGAAGGTCAAGCCCGGC 375997
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| | ||||| ||| |||||||| || || | ||||| | ||||| ||||| |||||
Sbjct 375996 ATGAGACCTCGCTTCTTAAGCCAGAAGATGGAAGCAAAGGCACCAGAGAAGAAGATGCCC 375937
Query 4674 TCTACGGCGGCAAACGC 4690
|| ||||| || || ||
Sbjct 375936 TCCACGGCAGCGAAGGC 375920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047689887211
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |