Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq10 226 4e-54
>seq10
Length=848763
Score = 226 bits (250), Expect = 4e-54
Identities = 1306/2071 (63%), Gaps = 59/2071 (3%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || |||| ||| || | | |||||| ||||||||||| ||||| || |||
Sbjct 459622 GTGAACTGGATGGGAGCAGAGGCAGCCTGTGTACGCAGATAGTACATGCCAGTCTTGAGA 459681
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| || |||||||||| || | ||| | || || ||
Sbjct 459682 CCGAGCTTCCAGCCAGCGAAATGCATGGAGGTGATCTTGCCCATCGTTGGTTCCTTCATG 459741
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|| || || | ||||| ||| || ||||| || || | ||| || ||||| | ||
Sbjct 459742 TGGATGTTGAGAGACTGGGATTGGTCAATGAACGCGCCACGATCGGCGGCCATCTGGATG 459801
Query 76962 A--TGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| ||| || | |||||||| | || ||| | | | ||| |||||||||||||
Sbjct 459802 ACATGGCGTT--GGCTTATTTCCCAGACCGTCTTGTACAATGCTTTAATATCATCTGGAA 459859
Query 77020 GGTTTGTATTT---TGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCAT 77076
||||| | | ||||| |||||||| || | || || ||||| |||| |||
Sbjct 459860 TGTTTGGAATGCGCTGAATCGAACCACCCTCCGCAATGATGCGGTTCTTCATATTGTCAG 459919
Query 77077 TCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTC 77136
|||||| | | || | | || | || | |||||| || | || || || |
Sbjct 459920 ACCACAAACCCATGTCAACGAGATCTTTGAGCAACCAAGGATTGACGACCTGGAACTCGC 459979
Query 77137 CAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 77196
| | | || | ||| | ||| || || ||||||||| || | | || ||||| |
Sbjct 459980 CGGCGAGCACGCGACGTGAGTAGATGTTTGAGGTATATGGCTCGAAGCACTCGTTGTTAC 460039
Query 77197 CCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 77256
||| || |||| ||| ||||| |||||||| || ||||| | ||| || | || ||
Sbjct 460040 CCAGGATCTGAGAAGTTGAAGCGGTTGGCATGGGCGCCACGAGTAAGGAGTTGCGGACAC 460099
Query 77257 CATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACAT 77316
|||| || |||| | | |||| || | ||| ||||| ||||| | || || |
Sbjct 460100 CATGCTTTTTGATCTCAGCTTTGAGGCTGTCCCAGTCCCAGAGATCAGTTGGAGTCACGT 460159
Query 77317 CCCAAAGATCGTATTGTAGAATTCCGTT----ACTAGCATATGATCCATTATATGTTTCA 77372
||| | || || || | ||| || | || || || || | ||| | |
Sbjct 460160 TCCACATGTCATACTGCAAAATCCCCTGGGACACGGGC----GAGCCCTCATAACTCGAA 460215
Query 77373 TAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431
|| || |||| || ||| || || ||||| ||| || || ||| || || ||
Sbjct 460216 TAGGGACCTTGCTCTTTG-GCAAGCTCACACGAAGCTGTCAGAGCGGCGTGGTATATGGT 460274
Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491
||| || || | | || || | || || | || || || | | |
Sbjct 460275 TTCAAAGATTTGGATGTTCAGCATACGAGCCTCTGGAGAGTCGAATGGCAGCCGCAGAGC 460334
Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551
| || ||||| || | ||||| || || | ||| ||||| | |||||| | ||
Sbjct 460335 GAGGAAAGCATCGGCAAGACCCTGCACACCGACACCGATAGGACGGTGTCTCATGTT--- 460391
Query 77552 AATTTTA---GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCT 77608
| | ||| || ||||| | ||| || | |||||||| || || || || | || |
Sbjct 460392 ACTGTTACGTGCCTCTGGTACAGGGTAGTGGTTAATGTCGATGATCTTGTTCAAGTTGCG 460451
Query 77609 AACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACAA- 77667
||| || || || | || || || || || ||| || |||
Sbjct 460452 AACGACATGGCGGGTGACCTCATGCAGCTTCTTGAAGTCGTATTCGCCACGCATGACATC 460511
Query 77668 ---ACATGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722
| | ||| || ||| | ||| || | ||||| || || ||||| | | | |
Sbjct 460512 GACAAAGGTTGGCAGAGCCAGAGAGGCCAAGTTACACACCGCGACCTCGTCTGGGGCAGT 460571
Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782
|| | || |||||||| || || || | ||| || ||||| |||| |||||
Sbjct 460572 GTACTCAATGATCTCGGTGCAAAGGTTGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTT 460631
Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842
|||||| ||||| | |||||| || || || || ||| | || || || ||||||
Sbjct 460632 GCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGC 460691
Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTT-ATCATAGATTTGTATCGC------- 77894
| | ||| | || || || ||||| | | || ||| || || |
Sbjct 460692 CTGAAGAATGG-----CATACCAC---AGCTTCTGAGCACGGATG-GTCTCACGACCACG 460742
Query 77895 -CTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCC 77951
| ||| | || |||| ||||| ||| ||||| || || || | ||||| |
Sbjct 460743 GCCCTCCTTCTCGTATTTCTCGTATAGGGCC--TCAAACTCTTCGCCGTAGACATCGGCG 460800
Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011
| ||||| |||||| || || | | || ||| ||||| | | ||||||||||
Sbjct 460801 AGGCCAGGTGCTTCATTGGGACAGAAGAGTGTCCACATACCATTCTGTTCAACTCGTTTC 460860
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
|| || |||||||| |||| | |||| || ||||| || | | | ||||| ||
Sbjct 460861 ATGAACAGATCAGGCGTCCACAAAGCATAGAAGAGATCACGAGCACGGTTCTCTTCCTTA 460920
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
|| ||||| | || || | | | ||| |||| ||||||||| || || ||
Sbjct 460921 CCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAAAATGTCAGCATGCCATGGCTCAAGGTAA 460980
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
|| || | | | || || || || || || |||||||| | ||||| |||||| ||
Sbjct 460981 ATGGCGAAAGCACCGGGGCGCTTGTTGCCACCCTGATCAACATATCGAGCGGTGGCATCG 461040
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251
|| || | |||||| ||||| | |||||| ||||| || || || ||| ||| ||
Sbjct 461041 TAGACACGCAACATAGGAATTAGACCGTTGGATGTGCCGTTGGTACCACCAATGTACGAA 461100
Query 78252 CCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGA 78311
||| | || ||||| | | | || || || || || |||| || || | |
Sbjct 461101 CCAGTCGCACGAATGCGGTGTACGTTCAGACCGATGCCACCGGCAGTCTTTGAAATCATA 461160
Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGA 78371
|| || || | || |||||||| |||||||| ||||| ||| |||| | | ||
Sbjct 461161 GCACAGGTCTTGAGCGTGTCGTAGATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGG 461220
Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431
|| ||| || | || | || || |||||||| | || ||||| || ||
Sbjct 461221 AAGCAGGAGGAGAGCTGCGGCGACGGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGT 461280
Query 78432 GTAAACCA-TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATT 78489
|| || | || ||| | |||| | ||| || ||||| || || ||||| ||
Sbjct 461281 GTGAAGTACTTATTCGACATGTAG-TCGTAAGTCTCAATGGCACTCTCAATGTCTTCACC 461339
Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTAT 78549
| || || || ||||| |||||||| | ||| ||||| ||||| || || ||| ||
Sbjct 461340 G-TGTATGCCAACCGCAACACGCATAATCATGTGCTGTGGTCTCTCTGCCACCTTGCCAT 461398
Query 78550 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 78609
| ||| | | ||| || | ||||| ||||| || |||||||| | ||| ||||
Sbjct 461399 TGATTCGGAGAAGGTAGGACCTCTCCAATGTTTTGAAGCCAAAATACTGGTAGTTGAAGT 461458
Query 78610 CTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGA 78669
| | ||||||| || | || || || | || || || | | |||| ||| |
Sbjct 461459 CACGGTCGTAAACGATGGCCGAGTTCAGCTCGTCCGCGTGCTTCATGATGATAT-CAT-A 461516
Query 78670 C--AGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAA 78727
| ||| | || || ||||| | | || ||||| || || |||||||| | |
Sbjct 461517 CGTAGTCTTCGAGATCATAGGGCAGTGCTTGCCGTTTTTTGGGTTGACATAGTTGTAGAG 461576
Query 78728 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTAT 78787
||| || || || | |||| | ||||| |||| |||||| || || ||||| |||||
Sbjct 461577 ATCATCGATGACTGCCGAAAATTGCTTTTTAGTTTGCTTGTGAAGGTTCGATACGGCTAT 461636
Query 78788 TCTTGCAGCTAGAATAGCATAATCAGGATGT 78818
| |||||| || | ||| || || ||||||
Sbjct 461637 ACGTGCAGCGAGCACAGCGTAGTCTGGATGT 461667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665613206880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |