Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq10 194 2e-44
>seq10
Length=848763
Score = 194 bits (214), Expect = 2e-44
Identities = 590/902 (65%), Gaps = 16/902 (2%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| || || || | ||||| | | ||||| |||||| ||||| | | || |
Sbjct 460774 TCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGAGTGTC 460833
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
||| ||||| | | ||| |||||||| || |||||||| |||| | |||| ||
Sbjct 460834 CACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGCATAGAAG 460893
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| || | | ||||| || || ||||| | || || | | | |
Sbjct 460894 AGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCCAAAA 460953
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
|| |||| ||||||||| || || || || || | | |||| || || || || || |||
Sbjct 460954 ATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCCACCC 461013
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
||||| | ||||| || ||| || || || | |||||| ||||| | ||||| |||
Sbjct 461014 TGATCAACATATCGAGCGGTGGCATCGTAGACACGCAACATAGGAATTAGACCGTTGGAT 461073
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATAT----TACTAATAGATAG 76875
|| || || || ||| ||| || ||| |||||||| ||| |||
Sbjct 461074 GTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACGTTCAGA--- 461130
Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCC 76935
|| || || || || | || || || | ||||||| || | ||||| ||||||||
Sbjct 461131 -CCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTCGTAGATGCC 461189
Query 76936 CTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 76995
|||||| || || ||| |||| | | || || ||| || | || | ||
Sbjct 461190 CTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGACGGCGT 461249
Query 76996 TCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA-TTTTTCAGAAAGTAGATTGT 77054
|| |||||||||| || ||||| || || ||||| | || ||| | |||| | ||
Sbjct 461250 GCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAG-TCGT 461308
Query 77055 ATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
| || ||||| | || || || || | || || || || || |||||||| | |
Sbjct 461309 AAGTCTCAATGGCACTCTCAATGTCTTCACCG-TGTATGCCAACCGCAACACGCATAATC 461367
Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173
|| ||||| |||| ||| | ||| ||| ||| | | ||| || | |||||
Sbjct 461368 ATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTCTCCAAT 461427
Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233
||||| || |||||||| | ||| ||||| | ||||||| || |||| || ||
Sbjct 461428 GTTTTGAAGCCAAAATACTGGTAGTTGAAGTCACGGTCGTAAACGATGGCCGAGTTCAGC 461487
Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGAC--AGTGGTAGAAATAATTGGAGATCGTA 77291
| |||| | || | | |||| ||| || ||| | || || || || | |
Sbjct 461488 TCGTCCGCGTGCTTCATGATGATAT-CAT-ACGTAGTCTTCGAGATCATAGGGCAGTGCT 461545
Query 77292 TTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351
| || ||||| || || |||||||| | | || || || || | |||| | ||||
Sbjct 461546 TGCCGTTTTTTGGGTTGACATAGTTGTAGAGATCATCGATGACTGCCGAAAATTGCTTTT 461605
Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411
| |||| |||||| || |||||||||||||| | ||||| || | || ||||| ||||
Sbjct 461606 TAGTTTGCTTGTGAAGGTTCGATACGGCTATACGTGCAGCGAGCACAGCGTAGTCTGGAT 461665
Query 77412 GT 77413
||
Sbjct 461666 GT 461667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931129413440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |