Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq18890 178 1e-39 seq28027 150 2e-31 seq26527 147 2e-30 seq22587 138 1e-27 seq11113 120 3e-22 seq23972 116 4e-21 seq1002 114 1e-20 seq20756 107 2e-18 >seq18890 Length=446397 Score = 178 bits (196), Expect = 1e-39 Identities = 306/439 (70%), Gaps = 4/439 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| || |||||| ||| | || | |||| | | |||| Sbjct 409082 AGAAGGCTGACTGGGCCTTGACATGGATCACCGATAAGAAGTCTACCTTTGCCACCCGCC 409141 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||||| ||| ||||| ||||||| || |||||| |||| || | Sbjct 409142 TCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCT 409201 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||||||||| |||||||||||| ||||||||||||||| | | Sbjct 409202 GGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTG 409261 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| || ||| |||||||| || ||| | || || | Sbjct 409262 ACGAGGGTCTTCACACCGACTTCGCTTGTCTGCTGTTCTCTCACTTGAACAACCGCCCCA 409321 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | | ||| || || |||||||| || ||| | ||||||||| ||||| | Sbjct 409322 GCAAGCAGACTGTCCAAGATATTGTCACCGATGCTGTCACTATCGAGCAGGAGTTCCTGA 409381 Query 117282 CCGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || | | || ||| ||||||| || | || || | | ||| ||| ||||| Sbjct 409382 CTGAGGCTCTTCCCTGTG-GTCTGCTTGGCATGAA-CGCTACTCTCATGAAGCAGTACAT 409439 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||| || ||| | || || ||| || | | || ||| ||||| | | Sbjct 409440 TGAGTTCGTTGCAGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTTTACAAGGCTAC 409499 Query 117400 CAACCCGCTGGACTTTATG 117418 |||||| | ||||| ||| Sbjct 409500 CAACCCATTCGACTTCATG 409518 Score = 159 bits (176), Expect = 4e-34 Identities = 302/439 (69%), Gaps = 4/439 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| || |||||| ||| | || | |||| | | |||| Sbjct 160548 AGAAGGCTGACTGGGCCTTGACATGGATCACCGATAAGAAGTCTACCTTTGCCACCCGCC 160489 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||||| ||| ||||| ||||||| || |||||| |||| || | Sbjct 160488 TCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCT 160429 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||||||||| |||||||||||| ||||||||||||||| | | Sbjct 160428 GGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTG 160369 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| || ||| |||||||| || ||| | || || | Sbjct 160368 ACGAGGGTCTTCACACCGACTTCGCTTGTCTGCTGTTCTCTCACTTGAACAACCGCCCCA 160309 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | | ||| || || |||||||| || ||| || ||||| ||||| | Sbjct 160308 GCAAGCAGACTGTCCAAGACATTGTCACCGATGCTGTCAATATTGAGCAAGAGTTCCTGA 160249 Query 117282 CCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || || || || ||| | ||||| || | || || | | ||| ||| ||||| Sbjct 160248 CTGAGGCTCTCCCCTGTG-GCCTGCTCGGCATGAA-CGCTACTCTCATGAAGCAGTACAT 160191 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||| || ||| | || || ||| || | | || ||| ||||| | | Sbjct 160190 TGAGTTCGTTGCAGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTTTACAAGGCTAC 160131 Query 117400 CAACCCGCTGGACTTTATG 117418 |||||| | ||||| ||| Sbjct 160130 CAACCCATTCGACTTCATG 160112 Score = 156 bits (172), Expect = 4e-33 Identities = 208/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||||| ||| ||| | || ||| Sbjct 160955 ATTTGGCAAATGTACAAGAAGGCAGAAGCTTCTTTCTGGACCGCCGAAGAGATTGATCTG 160896 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | | || | ||| | || | |||||| Sbjct 160895 TCCAAGGATCTCCA-CGACTGGAACAACAAGATCAATGACGATGAAAAGTACTTCATCTC 160837 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| || ||||| || ||||||||||||||||| || || ||||| Sbjct 160836 ACACATCCTTGCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCG 160777 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | ||||| ||||| ||||||| || |||||||||||||| |||||| || Sbjct 160776 CTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 160717 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||||| ||||| ||| Sbjct 160716 GGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTAC 160671 Score = 138 bits (152), Expect = 1e-27 Identities = 204/286 (71%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||||| ||| ||| | || || Sbjct 408676 ATTTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTA 408735 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | | || | || | || | |||||| Sbjct 408736 TCTAAGGATCTCCA-CGACTGGAACAACAAGATCAATGATGATGAAAAGTACTTCATCTC 408794 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| || ||||| || ||||||||||||||||| || || ||||| Sbjct 408795 ACACATCCTTGCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCG 408854 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | ||||| ||||| | ||||| || |||||||||||||| ||||| || Sbjct 408855 CTTCAGTGCCGAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGAT 408914 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||||| ||||| ||| Sbjct 408915 GGAGAACATCCACTCCGAGACTTACTCGCTGCTCATTGACACCTAC 408960 >seq28027 Length=10271 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| || |||||| ||| | || | |||| | | |||| Sbjct 5317 AGAAGGCTGACTGGGCCTTGACATGGATCACCGATAAGAAGTCTACCTTTGCCACCCGCC 5258 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||||| ||| ||||| ||||||| || |||||| |||| || | Sbjct 5257 TCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCT 5198 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||||||||| |||||||||||| ||||||||||||||| | | Sbjct 5197 GGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTG 5138 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199 |||||||||| || |||||| || ||| |||||||| Sbjct 5137 ACGAGGGTCTTCACACCGACTTCGCTTGTCTGCTGTTC 5100 >seq26527 Length=223112 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | || Sbjct 222803 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 222744 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||||||| | ||||| Sbjct 222743 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 222684 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | ||||| || |||||||||| Sbjct 222683 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAAC 222624 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||||||| |||| ||||| || ||| | ||| || | || || ||| Sbjct 222623 ATCCAGAAGGAGTCCACCCTGCACCTCGTGCTCCGCCTGCGTGGTGGTGGC 222573 >seq22587 Length=423 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | || Sbjct 86 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 145 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||||||| | ||||| Sbjct 146 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 205 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||| ||||| || || | ||||| || |||||||||| Sbjct 206 CAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAAC 265 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||||||| |||| ||||| || ||| | ||| || | || || ||| Sbjct 266 ATCCAGAAGGAGTCCACCCTGCACCTCGTGCTCCGCCTGCGTGGTGGTGGC 316 >seq11113 Length=490148 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || ||||| | || |||||| | || Sbjct 77445 ATGCAAATCTTCGTCAAGACACTCACCGGTAAGACTATCACATTGGAAGTCGAATCATCC 77386 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| ||||| ||||| | ||||| Sbjct 77385 GACACGATCGACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCA 77327 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 77326 ACAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTGTCTGACTACAA 77267 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||||||||||||| | || |||||| Sbjct 77266 CATCCAGAAGGAGTCGACCCTGCAT 77242 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| |||| || || | || Sbjct 77673 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCTTCC 77614 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 77613 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCA 77555 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| || || || ||||| || || | || || || ||||||||| Sbjct 77554 ACAGCGCCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACTCTGTCCGACTACAA 77495 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || || || || Sbjct 77494 CATTCAGAAGGAGTCGACTCTTCACCTCGT 77465 >seq23972 Length=267833 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || |||||||| || || || ||||| | || |||||| | || Sbjct 225295 ATGCAAATCTTCGTCAAGACGCTCACCGGTAAGACTATCACATTGGAAGTCGAATCATCC 225354 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| |||||||| || | || || Sbjct 225355 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCAA 225414 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 225415 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCTGACTACAAC 225474 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||||||| | || |||||| Sbjct 225475 ATCCAGAAGGAGTCGACCCTGCAT 225498 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| || | |||| | | | |||| | ||| Sbjct 224861 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTT-AAG 224919 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||||||||| | ||||| || || || || | ||| ||| Sbjct 224920 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTGATTTTCGCTGGC 224979 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||||| |||||||||||||||||||||| | || || Sbjct 224980 AAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTC 225039 Query 40891 CATCTAGT 40898 || || || Sbjct 225040 CACCTTGT 225047 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| || ||||| |||||||| | || || || | || Sbjct 225067 ATGCAGATCTTTGTCAAGACGCTGACCGGCAAGACCATCACTCTTGAGGTGGAGTCTTCC 225126 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 225127 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCA 225185 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| || || ||||| || || | || || | ||||||||| Sbjct 225186 ACAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGTACTTTGTCCGACTACAA 225245 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| |||| || || || || Sbjct 225246 CATTCAGAAGGAGTCCACTCTTCACCTCGT 225275 >seq1002 Length=198801 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || || || || |||||| | | Sbjct 112725 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCCTCCGACACCATT 112666 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| | ||||| || || || Sbjct 112665 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTG 112606 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 112605 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 112546 Query 40879 G 40879 | Sbjct 112545 G 112545 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || || || || |||||| | | Sbjct 118281 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCCTCCGACACCATC 118222 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| | ||||| || || || Sbjct 118221 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCTG 118162 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | ||| ||||| ||||| || || | ||||| | ||||||||||||||||||| Sbjct 118161 ATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCCGACTACAACATCCAGAAG 118102 Query 40879 G 40879 | Sbjct 118101 G 118101 >seq20756 Length=5129 Score = 107 bits (118), Expect = 2e-18 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| || | |||| | | | |||| | ||| Sbjct 5068 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTT-AAG 5010 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||||||||| | ||||| || || || || | ||| ||| Sbjct 5009 TCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTGATTTTCGCTGGC 4950 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAG 40881 || ||||| || || | |||||||| |||||||||||||||||||||| Sbjct 4949 AAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAG 4899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515038351620560